FastQCFastQC Report
Thu 21 Sept 2023
SRR18113785_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR18113785_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences95266042
Total Bases14.2 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAACAAA24889002.612578362392761No Hit
CCCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAACAAAAA16907781.7747961020570164No Hit
CCCCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAACAAAAA15490831.6260599973283238No Hit
CCCCGCTGCGATCTATTGAAAGTCAGCCCTCGAAAAAAAAAACAAAAAAA7533010.7907340162195466No Hit
CCCCGCTGCGATCTATTGAAAGTCAGCCCTCGACAAAAAAAAAACAAAAA6895000.7237626183735019No Hit
CCCCCGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAAAAAACAAAAAA6856420.7197129067249377No Hit
GGGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAACAAA6600730.6928733325564213No Hit
GGGGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAAAAAAAAAACAA5901150.6194389812059159No Hit
CCCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCCAAAAAAAAAACAAAAA5334790.5599886263774871No Hit
CCCCGCTGCGATCTATTGAAAGTCAGCCCTCGACATAAAAAAAAAACAAA4870460.5112482787938225No Hit
CCCCCGCCGAGGGCGCACCACCGGCCCGTCTCGTAAAAAAAAAACAAAAA4668410.49003925239173896No Hit
CCCCCGCCTGGATACCGCAGCTAGGAATAATGGAATAAAAAAAAAACAAA4654110.48853819286414774No Hit
GGGCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAACAAAAA4516970.4741427170869553No Hit
CCCCACTCGCCGAATCCCGGGGCCGAGGGAGCAAAAAAAAAACAAAAAAA4513220.4737490825954541No Hit
CCCCTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTCAAAAAAAAAACAA4409290.4628396338749961No Hit
CCCCACTCGCCGAATCCCGGGGCCGAGGGAGCGAAAAAAAAAACAAAAAA3957730.4154397429463901No Hit
CCCCCGCCGAGGGCGCACCACCGGCCCGTCTCAAAAAAAAAACAAAAAAA3729130.3914437843444782No Hit
CCCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAACAAAAAA3667330.38495668792453874No Hit
CCCCTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTAAAAAAAAAACAAA3284940.34481751640316916No Hit
GGGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAACAAAAAAAAA3106900.3261288004386705No Hit
GGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAACAAAAA2839080.2980159499016449No Hit
CCCCACTCGCCGAATCCCGGGGCCGAGGGAGAAAAAAAAAACAAAAAAAA2756560.2893538917046643No Hit
CCCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAA2614880.2744818557697611No Hit
CCCCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAA2611680.2741459543370134No Hit
GGGGCAGTTAAAAAGCTCGTAGTTGGATCTTGAAAAAAAAAACAAAAAAA2226760.23374121074537768No Hit
CCCCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAACAAAAAAA2225150.23357221033702646No Hit
GGGGCCGCCTGGATACCGCAGCTAGGAATAATGGAACAAAAAAAAAACAA2224020.23345359514358746No Hit
GGGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAACAAAAAAAA2043010.21445312066181985No Hit
CCCCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAACAA2017290.21175331289611043No Hit
GGGCCGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAAAAAACAAAAAA2011770.2111738829246207No Hit
CCCCGCTGCGATCTATTGAAAGTCAGCCCTCGACACGAAAAAAAAAACAA1986480.20851921191393677No Hit
CCCCGCTGCGATCTATTGAAAGTCAGCCCTCGATAAAAAAAAAACAAAAA1985860.2084541310113419No Hit
GGGAGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCAAAAAAAAAACA1965850.2063536973646916No Hit
CCCCGCTGCGATCTATTGAAAGTCAGCCCTCAAAAAAAAAACAAAAAAAA1929810.20257060747837097No Hit
CCCCCGCCTGGATACCGCAGCTAGGAATAATGGAACAAAAAAAAAACAAA1929110.20249712903995737No Hit
GGGCGCTGCGATCTATTGAAAGTCAGCCCTCGAAAAAAAAAACAAAAAAA1924430.2020058731945639No Hit
GGGAGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCGAAAAAAAAAAC1912560.2007598888174655No Hit
CCCCTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCAAAAAAAAAA1895060.19892292785712667No Hit
GGGCACTCGCCGAATCCCGGGGCCGAGGGAGCAAAAAAAAAACAAAAAAA1777180.18654915882828427No Hit
GGGCGCTGCGATCTATTGAAAGTCAGCCCTCGACAAAAAAAAAACAAAAA1772100.18601591530379735No Hit
CCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAACAAAAAA1769220.18571360401432443No Hit
CCCCGGGGAGGTAGTGACAAAAAAAAAACAAAAAAAAAAGATCGGAAGAG1702480.17870795975758078No Hit
GGGGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCAAAAAAAAAACAA1689020.17729507435608588No Hit
GGGGCAGTTAAAAAGCTCGTAGTTGGATCTTAAAAAAAAAACAAAAAAAA1675630.17588953679843233No Hit
CCCCGCTGCGATCTATTGAAAGTCAGCCCTCGACACATAAAAAAAAAACA1609060.1689017373053034No Hit
GGGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAAAAAAAAAACAAA1580310.16588387287046102No Hit
GGGCACTCGCCGAATCCCGGGGCCGAGGGAGCGAAAAAAAAAACAAAAAA1566320.1644153537941673No Hit
CCCCCGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAACAAAAAA1486420.15602831489524882No Hit
GGGGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCGAAAAAAAAAACA1461850.1534492217069331No Hit
CCCCACTCGCCGAATCCCGGGGCCGAGGGAAAAAAAAAACAAAAAAAAAA1448160.15201219338995944No Hit
CCCCGGGGAGGTAGTGACGAAAAATAACAAAAAAAAAACAAAAAAAAAAG1438470.1509950418639204No Hit
CCCCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAAA1407070.14769900905508387No Hit
GGGGCCGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAACAAAAA1400140.1469715725147897No Hit
GGGGCCGCCTGGATACCGCAGCTAGGAAAAAAAAAACAAAAAAAAAAGAT1399760.1469316842196509No Hit
GGGCCGCCGAGGGCGCACCACCGGCCCGTCTCGTAAAAAAAAAACAAAAA1391420.14605624111055227No Hit
CCCCCGCCTGGATACCGCAGCTAGGAAAAAAAAAACAAAAAAAAAAGATC1336020.1402409475561082No Hit
CCCTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCAAAAAAAAAAC1335480.140184264189332No Hit
CCCCGGGGAGGTAGTGACGAAAAATAACAATACAGGAAAAAAAAAACAAA1322570.1388291118465906No Hit
CCCCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAGAAAAAAAAAACA1299410.13639802522707933No Hit
GGGCGCTGCGATCTATTGAAAGTCAGCCCTCGACATAAAAAAAAAACAAA1288750.13527905357923867No Hit
CCCCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAACAAAA1258780.13213312672316124No Hit
GGGCGGGGAGGTAGTGACGAAAAATAACAAAAAAAAAACAAAAAAAAAAG1220090.12807186846284638No Hit
GGGGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAACAAAA1182520.12412817570399323No Hit
CCCAGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCAAAAAAAAAACA1155620.12130450428495812No Hit
CCCCTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCCAAAAAAAAAACAAA1155080.12124782091818195No Hit
CCCCGCCGAGGGCGCACCACCGGCCCGTCTCGTAAAAAAAAAACAAAAAA1146670.12036502996524198No Hit
GGGCGGGGAGGTAGTGACGAAAAATAACAATACAGGAAAAAAAAAACAAA1136140.11925970431310665No Hit
GGGGGGGGCCCAAGTCCTTCTGATCGAGGTAAAAAAAAAACAAAAAAAAA1135680.11921141848214918No Hit
CCCAGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCGAAAAAAAAAAC1100340.11550180703424208No Hit
GGGCCGCCGAGGGCGCACCACCGGCCCGTCTCAAAAAAAAAACAAAAAAA1080040.113370932320249No Hit
CCCCGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAAAAAACAAAAAAA1070700.11239052001341673No Hit
CCCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAACAAAA1063450.11162949332984778No Hit
GGGCGGGGAGGTAGTGACAAAAAAAAAACAAAAAAAAAAGATCGGAAGAG1026860.10778867038477363No Hit
GGGCACTCGCCGAATCCCGGGGCCGAGGGAGAAAAAAAAAACAAAAAAAA1024590.10755039030591823No Hit
GGGGCAGTTAAAAAGCTCGTAGTTGGATCTTGGAAAAAAAAAACAAAAAA1021860.10726382439610538No Hit
GGGCTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTCAAAAAAAAAACAA1019780.10704548846481939No Hit
GGGGCGCCGCGACCGGCTCCGGGACGGCTGGGAAAAAAAAAACAAAAAAA999820.10495030327805578No Hit
CCCCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAGAAAAAAAAAAC972570.10208989263981388No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)