FastQCFastQC Report
Thu 21 Sept 2023
SRR18488801_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR18488801_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10209901
Total Bases1.5 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC66

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTTCAGAGCCGTGTAGATC1663181.6289873917484605Illumina Single End Sequencing Primer (100% over 33bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG378540.37075775759236057No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)