FastQCFastQC Report
Thu 21 Sept 2023
SRR18488803_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR18488803_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17706613
Total Bases2.6 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC65

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGGATAGGGTGTAGATC1235890.697982160676353Illumina Single End PCR Primer 1 (97% over 35bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG535070.3021865333590337No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)