FastQCFastQC Report
Thu 21 Sept 2023
SRR18488809_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR18488809_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29388371
Total Bases4.4 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTGCCTCTATGTGTAGATC1084110.36889081058626894Illumina Single End Sequencing Primer (100% over 33bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG482870.16430648707953224No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)