FastQCFastQC Report
Thu 21 Sept 2023
SRR18584196_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR18584196_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14560288
Total Bases385 Mbp
Sequences flagged as poor quality0
Sequence length20-50
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCGTTGTAGTCTAGCTGGTCAGGATATT337250.2316231656956236No Hit
TCCGTTGTAGTCTAGCTGGTCAGGATA177810.1221198371900336No Hit
GGGAGAATCTTAGCGACAAAGGGCTA155380.10671492212241955No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)