FastQCFastQC Report
Wed 6 Sept 2023
SRR18677074_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR18677074_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12906973
Total Bases1.9 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAACAAAAA534440.414070750748452No Hit
CCCCCGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAAAAAACAAAAAA326260.2527780913464373No Hit
CCCCCGCCGAGGGCGCACCACCGGCCCGTCTCAAAAAAAAAACAAAAAAA281760.2183006038673824No Hit
GGGGAGATTAGCGGAACGCTCTGGAAAGTGCAAAAAAAAAACAAAAAAAA280610.21740961261792366No Hit
CCCCTAAGGCCGAGAGCTGATGACGAGTTAAAAAAAAAACAAAAAAAAAA229590.17788059214193752No Hit
CCCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAACAAAAA192660.1492681514093196No Hit
GGGGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAACAAAAAAA158580.12286381942536023No Hit
CCCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAACAAAAAA138150.10703516618497613No Hit
GGGGGCCATAGTGGGTGATAGCCCTGTACGCAAAAAAAAAACAAAAAAAA133990.10381210218693415No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)