FastQCFastQC Report
Wed 6 Sept 2023
SRR18677076_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR18677076_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14371722
Total Bases2.1 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAACAAAAA287320.19992037140712854No Hit
GGAAGAGCACACGTCTGAACTCCAGTCACGTCCGCACATCTCGTATGCCG255600.17784925146756944TruSeq Adapter, Index 18 (97% over 36bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)