FastQCFastQC Report
Fri 8 Sept 2023
SRR18677079_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR18677079_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13809780
Total Bases2 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGAGCACACGTCTGAACTCCAGTCACAGTCAACAATCTCGTATGCCG197930.14332596174595105TruSeq Adapter, Index 13 (97% over 36bp)
CCCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAACAAAAA175390.12700419557733722No Hit
GGGGGGGAGGAAGGGAGTAAAAAAAAAACAAAAAAAAAAGATCGGAAGAG138470.10026951913788633No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)