FastQCFastQC Report
Wed 6 Sept 2023
SRR18677098_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR18677098_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8013015
Total Bases1.2 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAACAAAAA144680.180556257538517No Hit
CCCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAACAAAAA126730.1581552012569551No Hit
GGGGGGCGCGTAAAAAAAAAACAAAAAAAAAAGATCGGAAGAGCACACGT96260.12012956421521737No Hit
GGGGGGGCCGTAAAAAAAAAACAAAAAAAAAAGATCGGAAGAGCACACGT94450.11787073904142198No Hit
GGGGGACGCATAGCTCAAAAAAAAAACAAAAAAAAAAGATCGGAAGAGCA82350.10277030555914347No Hit
CCCCCGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAAAAAACAAAAAA80530.1004990006882553No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)