FastQCFastQC Report
Thu 28 Sept 2023
SRR1910735.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1910735.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41019618
Total Bases2 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCCTTTTGCTCGCCGGCCGAGGTGGGATCCCGAGGCCTCTCCAAAAAAA438740.10695857772249366No Hit
CTTTCTTTGCTCGCCGGCCGAGGTGGGATCCCGAGGCCTCTCCAAAAAAA422590.10302143720597301No Hit
TTTTCTTTGCTCGCCGGCCGAGGTGGGATCCCGAGGCCTCTCCAAAAAAA417030.10166598821081171No Hit
TTTCCTTTGCTCGCCGGCCGAGGTGGGATCCCGAGGCCTCTCCAAAAAAA416320.10149290029955911No Hit
TTTCTTTTGCTCGCCGGCCGAGGTGGGATCCCGAGGCCTCTCCAAAAAAA410570.10009113200420344No Hit
TCTCTTTTGCTCGCCGGCCGAGGTGGGATCCCGAGGCCTCTCCAAAAAAA410490.10007162914096371No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)