FastQCFastQC Report
Sat 23 Sept 2023
SRR19142908.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR19142908.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences86963867
Total Bases5.6 Gbp
Sequences flagged as poor quality0
Sequence length5-105
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACAAGTTTTTTTTTTTCGCCGGCGCGCCCCCGCGGGGGAGACCCCCCCC26543353.0522274268231424No Hit
TACAAGTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT4918900.5656257213125079No Hit
TACAAGTTTTTTTTTTTGCCGGCGCGCCCCCGCGGGGGAGACCCCCCCCC2848320.32752913345033285No Hit
TACAAGTTTTTTTTTTTGGGGTCGGGAGGAACGGGGGGCGGGAAAGATCC2583990.29713375096348926No Hit
TACAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2434320.2799231547511566No Hit
TACAAGTTTTTTTTTTTGGCCGGCGCGCCCCCGCGGGGGAGACCCCCCCC2325370.26739496301377674No Hit
TACAAGTTTTTTTTTTTAGGGGTCGGGAGGAACGGGGGGCGGGAAAGATC2289970.26332430686413705No Hit
TACAAGTTTTTTTTTTTTCGCCGGCGCGCCCCCGCGGGGGAGACCCCCCC2159450.24831577464235807No Hit
TACAAGTTTTTTTTTTTCCGCCGGCGCGCCCCCGCGGGGGAGACCCCCCC1644000.18904403135614933No Hit
TACAAGTTTTTTTTTTTGGGGGTCGGGAGGAACGGGGGGCGGGAAAGATC1642600.18888304495475114No Hit
TACAAGTTTTTTTTTTTTGCCGGCGCGCCCCCGCGGGGGAGACCCCCCCC1581020.18180194309896544No Hit
TACAAGTTTTTTTTTTTCACCGGCGCGCCCCCGCGGGGGAGACCCCCCCC1428190.16422797758061977No Hit
TACAAGTTTTTTTTTTTACGCCGGCGCGCCCCCGCGGGGGAGACCCCCCC1205470.1386173409239035No Hit
TACAAGTTTTTTTTTTTACGCAGAGTACTAACCACTATACGATCACGGCC1090650.1254141562035184No Hit
TACAAGTTTTTTTTTTTCGGCCGGGCGCTTGGCGCCAGAAGCGAGAGCCC1036470.11918398246940883No Hit
TACAAGTTTTTTTTTTTCGCGTTGCGGGTTGAGCTCGACTCCGTGTACCC891060.1024632448784735No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)