FastQCFastQC Report
Sat 23 Sept 2023
SRR19142909.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR19142909.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1108222
Total Bases84.2 Mbp
Sequences flagged as poor quality0
Sequence length6-105
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGTCATTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT990758.939995777019407No Hit
TGGTCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT231182.086044131951901No Hit
TGGTCATTTTTTTTTTTCGCCGGCGCGCCCCCGCGGGGGAGACCCCCCCC223932.0206240265939495No Hit
TGGTCATTTTTTTTTTTAGGGGTCGGGAGGAACGGGGGGCGGGAAAGATC110340.9956488862339857No Hit
TGGTCATTTTTTTTTTTGCCGGCGCGCCCCCGCGGGGGAGACCCCCCCC103600.9348307469081104No Hit
TGGTCATTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT97460.8794266852670313No Hit
TGGTCATTTTTTTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT87560.7900944034678972No Hit
TGGTCATTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT81060.7314418952159405No Hit
TGGTCATTTTTTTTTTTGGGGTCGGGAGGAACGGGGGGCGGGAAAGATCC77430.6986867252229246No Hit
TGGTCATTTTTTTTTTTGGGGGTCGGGAGGAACGGGGGGCGGGAAAGATC66830.6030380194581952No Hit
TGTTCATTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT42760.3858432696697954No Hit
TGGTCATTTTTTTTTTTCCC41280.37248854471396525No Hit
TGGTCATTTTTTTTTTTGCCCCCCGGGTGCCCGGGCCCCCCTCGCGGGGG36950.33341695075535405No Hit
TGGTCATTTTTTTTTTTGCGGCCGGGCGCTTGGCGCCAGAAGCGAGAGCC34650.31266298629696937No Hit
TGGTCATTTTTTTTTTTACGCCGGCGCGCCCCCGCGGGGGAGACCCCCCC33230.29984966910961885No Hit
TGGTCATTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT32280.29127737944202514No Hit
TGGTCATTTTTTTTTTTACGCAGAGTACTAACCACTATACGATCACGGCC30790.2778324198581151No Hit
TGGTCATTTTTTTTTTTCGGCCGGGCGCTTGGCGCCAGAAGCGAGAGCCC30560.2757570234122766No Hit
TGGTCATTTTTTTTTTTCGCCGGCGCGCCCCCGCGGGGGAGACCCCCCC29470.26592144895156383No Hit
TGGTCATTTTTTTTTTTGAGGGGTCGGGAGGAACGGGGGGCGGGAAAGAT25180.22721079350527243No Hit
TGGTCATTTTTTTTTTTGGCCGGGCGCTTGGCGCCAGAAGCGAGAGCCCC24700.2228795313574356No Hit
TTGTCATTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT24240.21872873846575866No Hit
TGGTCATTTTTTTTTTTGGCCGGCGCGCCCCCGCGGGGGAGACCCCCCCC23620.2131341915248028No Hit
TGGTCATTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC21770.1964407853300151No Hit
TGGTCATTTTTTTTTTTGCCGGCGCGCCCCCGCGGGGGAGACCCCCCCCC20540.1853419260761833No Hit
TGGTCATTTTTTTTTTTCGCAGAGTACTAACCACTATACGATCACGGCCC20010.1805594907879468No Hit
TGGTCATTTTTTTTTTTGCCCCGCGGCGGGCCGCCGCCGGCCCCCC19330.17442353607851133No Hit
TGGTCATTTTTTTTTTTGCGCAGAGTACTAACCACTATACGATCACGGCC18830.16991180467451467No Hit
TGGTCATTTTTTTTTTTCGGGGTCGGGAGGAACGGGGGGCGGGAAAGATC18750.1691899276498752No Hit
TGGTCATTTTTTTTTT18350.16558054252667787No Hit
TGGTCATTTTTTTTTTTTCGCCGGCGCGCCCCCGCGGGGGAGACCCCCCC17570.15854224153644306No Hit
TGGTCATTTTTTTTTTTGGGTCGGGAGGAACGGGGGGCGGGAAAGATCCG17220.1553840295536454No Hit
TGGTCATTTTTTTTTTAGGGGTCGGGAGGAACGGGGGGCGGGAAAGATCC17000.15339886773588685No Hit
TGGTCATTTTTTTTTTTGCCGGCGCGCCCCCGCGGGGGAGACCCCCCC16440.14834572856341058No Hit
TGGTCATTTTTTTTTTTCCGCCGGCGCGCCCCCGCGGGGGAGACCCCCCC16340.14744338228261125No Hit
TGGTCATTTTTTTTTTCGCCGGCGCGCCCCCGCGGGGGAGACCCCCCCC16040.14473634344021324No Hit
TGGTCATTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCC15550.1403148466642965No Hit
TGGTCATTTTTTTTTTTTGCCGGCGCGCCCCCGCGGGGGAGACCCCCCCC15130.1365249922849393No Hit
TTTTCATTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT14560.1313816184843831No Hit
TTGGCATTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT13870.1251554291468677No Hit
CGGTCATTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT13780.12434331749414829No Hit
TGGTCATTTTTTTTTTTCACCGGCGCGCCCCCGCGGGGGAGACCCCCCCC13610.12280932881678942No Hit
TGGTCATTTTTTTTTTTGTCGGCGCGCCCCCGCGGGGGAGACCCCCCCC13000.11730501650391348No Hit
TGGTCATTTTTTTTTTTGGGGGGTCGGGAGGAACGGGGGGCGGGAAAGAT12800.11550032394231481No Hit
TGGTCATTTTTTTTTTTGCCGGCGGACCCCGCCCCGGGCCCCTCGCGGGG12540.11315422361223652No Hit
TGGTCATTTTTTTTTTTTGGGGTCGGGAGGAACGGGGGGCGGGAAAGATC12260.11062765402599842No Hit
TGGTCATTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCC11660.1052135763412024No Hit
TGGTCATTTTTTTTTTTTAGGGGTCGGGAGGAACGGGGGGCGGGAAAGAT11350.10241630287072445No Hit
TGGTCATTTTTTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT11310.10205536435840472No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)