FastQCFastQC Report
Sat 23 Sept 2023
SRR19749678_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR19749678_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54414317
Total Bases2.7 Gbp
Sequences flagged as poor quality0
Sequence length50
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACGAGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCGGTCCTGGAAT605970.11136223578805556No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)