FastQCFastQC Report
Sat 23 Sept 2023
SRR19749681_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR19749681_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50857670
Total Bases2.5 Gbp
Sequences flagged as poor quality0
Sequence length50
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACGAGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCGGTCCTGGAAT614520.12083133183254365No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)