FastQCFastQC Report
Fri 30 Jun 2023
SRR2057649.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2057649.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2673445
Total Bases83.1 Mbp
Sequences flagged as poor quality0
Sequence length24-113
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGGACCGGGGTCCGGTGCGGAGAGCCGT186400.6972277342529957No Hit
CGGGACCGGGGTCCGGTGCGGAGAGCCGTT104610.3912928824045379No Hit
CGGGACCGGGGTCCGGTGCGGAGAGCCGTTC83650.31289216722244145No Hit
CGGGACCGGGGTCCGGTGCGGAGAGCCGTTCG30550.11427203477161489No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)