FastQCFastQC Report
Sat 23 Sept 2023
SRR20613395_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR20613395_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16970462
Total Bases505.7 Mbp
Sequences flagged as poor quality0
Sequence length13-48
%GC53

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCGACTGCATAATTTGTGGTAGTGGGGG2282171.3447895525767064No Hit
TCGACTGCATAATTTGTGGTAGTGGGGG2121441.2500779295224844No Hit
GACTGCATAATTTGTGGTAGTGGGGG1867871.1006594870546247No Hit
CGACTGCATAATTTGTGGTAGTGGGGG1181370.696133081114704No Hit
GACTGCATAATTTGTGGTAGTGGGGGA607600.3580338590664179No Hit
AATGGATTTTTGGAGCAGGGAGATGGA468730.27620344101415745No Hit
TGACTGCATAATTTGTGGTAGTGGGGG279950.16496309882429835No Hit
AAATGGATTTTTGGAGCAGGGAGATGGA269230.15864624074465386No Hit
CGACTGCATAATTTGTGGTAGTGGGGGA225690.1329898973875903No Hit
AGGTCGGTTTCTATCTACTTCAAATTCCTC219870.12956040913912656No Hit
ATGTACACGGAGTCGAGCTCAACCCGCAAC191350.11275473820335594No Hit
ACTGCATAATTTGTGGTAGTGGGGG189360.11158211249640698No Hit
CTCGACTGCATAATTTGTGGTAGTGGGG178740.10532418033168454No Hit
TCGACTGCATAATTTGTGGTAGTGGGGGA177440.1045581434376978No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)