FastQCFastQC Report
Sat 23 Sept 2023
SRR20613397_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR20613397_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13818135
Total Bases410.6 Mbp
Sequences flagged as poor quality0
Sequence length13-48
%GC51

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCGACTGCATAATTTGTGGTAGTGGGGG1836781.3292531879302092No Hit
TCGACTGCATAATTTGTGGTAGTGGGGG1538561.1134353514421447No Hit
GACTGCATAATTTGTGGTAGTGGGGG1385401.002595502215024No Hit
CGACTGCATAATTTGTGGTAGTGGGGG772140.5587874195757966No Hit
GACTGCATAATTTGTGGTAGTGGGGGA518920.3755354828998269No Hit
AATGGATTTTTGGAGCAGGGAGATGGA353460.255794287724067No Hit
AGGTCGGTTTCTATCTACTTCAAATTCCTC289960.20984018465588877No Hit
TGACTGCATAATTTGTGGTAGTGGGGG216680.15680842602854872No Hit
AAATGGATTTTTGGAGCAGGGAGATGGA207250.14998406080125865No Hit
TCGACTGCATAATTTGTGGTAGTGGGGGA194210.14054718672237607No Hit
CGACTGCATAATTTGTGGTAGTGGGGGA170860.12364910315321134No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)