FastQCFastQC Report
Sat 1 Jul 2023
SRR2075926.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2075926.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34606362
Total Bases1.7 Gbp
Sequences flagged as poor quality0
Sequence length50
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTAAACCATTCGTAGACGACCTGCTTCTGTAGGCACCATCAATAGATCGG13124663.7925569870649793No Hit
ACCTCTAGCATCACCAGTATTAGAGGCCTGTAGGCACCATCAATAGATCG4434541.2814233405984714No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAAT3632171.0495671287262152No Hit
TTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCTGTAGGCACCAT2928490.8462287945782918No Hit
ATTGATCATCGACACTTCGAACGCACTGTAGGCACCATCAATAGATCGGA2643710.7639375673178244No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAATAGATC2613170.7551126003941125No Hit
TTTGATCATCGACACTTCGAACGCACTGTAGGCACCATCAATAGATCGGA2341900.6767252795887646No Hit
CCTCTAGCATCACCAGTATTAGAGGCCTGTAGGCACCATCAATAGATCGG2008110.5802719164759359No Hit
CCGCCACGCAGTTTTATCCGGTAACTGTAGGCACCATCAATAGATCGGAA1982660.5729177773728427No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCCTGTAGGCACCATCAATAG1947260.5626884443964378No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTCTGTAGGCACCATCAATAG1862940.5383229823464253No Hit
ACGAGACTCTGGCATGCTAACTAGTTACGCGACCCCCTGTAGGCACCATC1779480.5142060295156133No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAATAGATCG1695520.489944594580615No Hit
CGCGCTACACTGACTGGCTCAGCGCTGTAGGCACCATCAATAGATCGGAA1641280.4742711759184626No Hit
TCCTTCTGATCGAGGCCCTGTAGGCACCATCAATAGATCGGAAGAGCACA1480300.42775371765457465No Hit
CCGCCACGCAGTTTTATCCGGTAAACTGTAGGCACCATCAATAGATCGGA1320730.38164369892449257No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGGCTGTAGGCACCATCAATA1311640.37901701427038187No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATCTGTAGGCACCATCAA1304170.3768584516338354No Hit
TCTAAACCATTCGTAGACGACCTGCTTCTGTAGGCACCATCAATAGATCG1225540.35413719592946524No Hit
CCCGTCGCCGCGCTCTCCCCCCTCCCGGCGCCTGTAGGCACCATCAATAG1168760.33772980817804543No Hit
CCGTCGCCGCGCTCTCCCCCCTCCCGGCGCCTGTAGGCACCATCAATAGA1130900.3267896232490431No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCCTGTAGGCACCATCAATA1022900.29558148874475737No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATGCTGTAGGCACCATCA1022430.2954456755668221No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACACTGTAGGCACCATCAAT865370.2500609569997563No Hit
TTTGATCATCGACACTTCGAACGCACCTGTAGGCACCATCAATAGATCGG850220.2456831492429051No Hit
ACGCGCGCTACACTGACTGGCTCAGCGCTGTAGGCACCATCAATAGATCG843360.24370085477346623No Hit
TGGATAACTGTGGTAATTCTAGAGCTAATACATGCTGTAGGCACCATCAA835430.24140936860106824No Hit
ACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCTGTAGGCACCA822050.23754302749303727No Hit
ATTGATCATCGACACTTCGAACGCACCTGTAGGCACCATCAATAGATCGG816830.23603463432533014No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAATA803100.23206715574436862No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCTGTAGGCACCATCAATAGATCGG797020.2303102533574607No Hit
CTAAACCATTCGTAGACGACCTGCTTCTGTAGGCACCATTAATAGATCGG778900.22507422190174167No Hit
CGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAATAGATCG756900.21871700931753532No Hit
ACGCCTGTCTGAGCGTCGCTCTGTAGGCACCATCAATAGATCGGAAGAGC740130.21387107954311985No Hit
CTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCTGTAGGCACCAT736820.21291460801340514No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAATCTGTAGGCACCATCAAT732790.2117500822536619No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTTCTGTAGGCACCATCAATA713330.20612683875872304No Hit
TGGATAACTGTGGTAATTCTAGAGCTAATACACTGTAGGCACCATCAATA703630.20332388593750478No Hit
CCTCTAGCATCACCAGTATTAGAGGCTGTAGGCACCATCAATAGATCGGA692330.20005859038288973No Hit
CTGGATTGAGGCTCCAGTCCTGTAGGCACCATCAATAGATCGGAAGAGCA688760.19902698815899805No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATTAAT658440.19026559336112822No Hit
CGCGCGCTACACTGACTGGCTCAGCGCTGTAGGCACCATCAATAGATCGG656650.18974834742814053No Hit
GCGAGCGCACGGGGTCGGCGGCGACTGTAGGCACCATCAATAGATCGGAA654440.18910973652763616No Hit
ACCCGTCGCCGCGCTCTCCCCCCTCCCGGCGCCTGTAGGCACCATCAATA644460.18622587372807345No Hit
CTGGATTGAGGCTCCAGTCTGTAGGCACCATCAATAGATCGGAAGAGCAC630250.18211969232709294No Hit
CCTAAACCATTCGTAGACGACCTGCTTCTGTAGGCACCATCAATAGATCG603960.17452282328896634No Hit
CTAAACCATTCGTAGACGACCTGCTTCTGTAGGCACTATCAATAGATCGG603080.1742685347855981No Hit
CTCTAGCATCACCAGTATTAGAGGCTGTAGGCACCATCAATAGATCGGAA582510.16832454101936517No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCCTGTAGGCACCATCAATAG576320.1665358525695362No Hit
CGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAATAGATCGG570170.16475872268804218No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCTGTAGGCACCATCAATAGA548590.1585228750713525No Hit
TCGCGCTACACTGACTGGCTCAGCGCTGTAGGCACCATCAATAGATCGGA525520.15185647078418701No Hit
CGGGGCGCGGGACATGTGGCGTACCTGTAGGCACCATCAATAGATCGGAA517920.1496603428005521No Hit
GCGCGCTACACTGACTGGCTCAGCGCTGTAGGCACCATCAATAGATCGGA515330.148911925500866No Hit
TAAGGCCTACTTCACAAAGCGCCTTCCCTGTAGGCACCATCAATAGATCG504980.1459211459442053No Hit
AAACCATTCGTAGACGACCTGCTTCTGTAGGCACCATCAATAGATCGGAA493110.1424911407908176No Hit
CCGCCACGCAGTTTTATCCGGTACTGTAGGCACCATCAATAGATCGGAAG492890.14242756866497552No Hit
GCCTGTCTGAGCGTCGCTCTGTAGGCACCATCAATAGATCGGAAGAGCAC487000.14072556947765846No Hit
CTAAACCATTCGTAGACGACCTGCTTCTGTAGGTACCATCAATAGATCGG486120.1404712809742902No Hit
CTAAACCATTCGTAGACGACCTGCTTCTGTAGGCATCATCAATAGATCGG481740.1392056177416164No Hit
TCTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCTGTAGGCACCA479130.13845142115776282No Hit
ATCCTGCCGACTACGCCACTGTAGGCACCATCAATAGATCGGAAGAGCAC469560.13568603368363308No Hit
ATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGCTGTAGGCACCATC468350.13533638699150174No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCCCTGTAGGCACCATCAATAGA462750.13371818742461283No Hit
TTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCTGTAGGCACCATC450930.1303026304816438No Hit
ATTGATCATCGACACTTCGAACGCACTGTAGGCACCATTAATAGATCGGA447950.1294415171406922No Hit
CGGGGCGCGGGACATGTGGCGTACTGTAGGCACCATCAATAGATCGGAAG447850.1294126207198549No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATGGAATCTGTAGGCACCATCA446160.12892427120770453No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGACTGTAGGCACCATCAATAGAT443120.12804582001425055No Hit
TAAACCATTCGTAGACGACCTGCTTCTGTAGGCACCATCAATAGATCGGA441670.12762682191210967No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTTCTGTAGGCACCATCAATAG439290.12693908709618193No Hit
TTGATCATCGACACTTCGAACGCACTGTAGGCACCATCAATAGATCGGAA434400.12552605211723786No Hit
GTCCTTCTGATCGAGGCCCTGTAGGCACCATCAATAGATCGGAAGAGCAC427000.12338771697527756No Hit
CTAAACCATTCGTAGACGACCTGCTTCTGTAGGCACCATCAATAGATTGG426510.12324612451317478No Hit
CGGCCGAGGTGGGATCCCGCTGTAGGCACCATCAATAGATCGGAAGAGCA409230.11825282299248907No Hit
TAAGGCCTACTTCACAAAGCGCCTTCCTGTAGGCACCATCAATAGATCGG393580.11373053313145137No Hit
GTCGCCGCGCTCTCCCCCCTCCCGGCGCCTGTAGGCACCATCAATAGATC389910.11267003448672241No Hit
CGCCACGCAGTTTTATCCGGTAAACTGTAGGCACCATCAATAGATCGGAA389460.11254000059295456No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACCTGTAGGCACCATC388310.11220769175332558No Hit
TCTGATCGAGGCCCTGTAGGCACCATCAATAGATCGGAAGAGCACACGTC382760.11060394039685535No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCTGTAGGCACCATC380260.10988152987592283No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATCTGTAGGCACCATCA376850.10889616192537083No Hit
CCGCGCTCTCCCCCCTCCCGGCGCCTGTAGGCACCATCAATAGATCGGAA361600.10448945774768235No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTCTGTAGGCACCATC360760.10424672781264901No Hit
TAACTGTGGTAATTCTAGAGCTACTGTAGGCACCATCAATAGATCGGAAG360610.10420338318139306No Hit
TTTCTAGAGCTAATACATGCCTGTAGGCACCATCAATAGATCGGAAGAGC360190.1040820182138764No Hit
AGCTAGGAATAATGGAATCTGTAGGCACCATCAATAGATCGGAAGAGCAC358060.10346652445004187No Hit
CTCTAGCATCACCAGTATTAGAGGCCTGTAGGCACCATCAATAGATCGGA356450.10300129207456132No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACTATCAAT355210.10264297645617877No Hit
TCTAGCATCACCAGTATTAGAGGCTGTAGGCACCATCAATAGATCGGAAG352220.10177897347314346No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAACTGTAGGCACCATCAA351950.10170095313688275No Hit
CGCGCTCTCCCCCCTCCCGGCGCCTGTAGGCACCATCAATAGATCGGAAG351350.10152757461185893No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)