FastQCFastQC Report
Sat 23 Sept 2023
SRR20820093_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR20820093_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13642382
Total Bases1 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTATGTATGTAAGCGTATTACCGGTGGCTGTAGGCACCATCAATAGATCG9202346.745405604387855No Hit
TTATGTATGTAAGCGTATTACCGGTGGAGCTGTAGGCACCATCAATAGAT4208063.0845493111100395No Hit
TATGTATGTAAGCGTATTACCGGTGGCTGTAGGCACCATCAATAGATCGG3854732.825554950741007No Hit
ACGATGCCAGCTAGCAATTGGGTGTAGCTCTGTAGGCACCATCAATAGAT3492262.5598608805998837No Hit
ATGTATGTAAGCGTATTACCGGTGGAGCTGTAGGCACCATCAATAGATCG2418791.772996827093685No Hit
TATGTATGTAAGCGTATTACCGGTGGAGCTGTAGGCACCATCAATAGATC2267251.6619165186842006No Hit
ACGTAGCCAATTGTGGAACTTTCTTGCTCTGTAGGCACCATCAATAGATC1817051.3319154968685087No Hit
TTATGTAAGTGGAGCCGTACCTGTTGGTTTGTCCCCTGTAGGCACCATCA1802011.320891029147256No Hit
ATTTTGAACGCATATCGCAGTCCATGCTGCTGTAGGCACCATCAATAGAT1746971.280546168550331No Hit
TAACGATGCCAGCTAGCAATTGGGTGTAGCTCTGTAGGCACCATCAATAG1635231.1986396510521402No Hit
ATGTAAGTGGAGCCGTACCTGTTGGTTTGTCCCCTGTAGGCACCATCAAT1605161.1765980457078538No Hit
AACGATGCCAGCTAGCAATTGGGTGTAGCTCTGTAGGCACCATCAATAGA1586281.1627588202705363No Hit
ATGTATGTAAGCGTATTACCGGTGGCTGTAGGCACCATCAATAGATCGGA1582381.1599000819651584No Hit
TGTAAGTGGAGCCGTACCTGTTGGTTTGTCCCCTGTAGGCACCATCAATA1565011.1471677013588977No Hit
AGTTACGTAGCCAATTGTGGAACTTTCTTGCTCTGTAGGCACCATCAATA1519111.1135225505340636No Hit
ACAACCTCAACTCATATGGGACTACCCCCTGAATCTGTAGGCACCATCAA1445841.0598149208840508No Hit
TGTATGTAAGCGTATTACCGGTGGAGCTGTAGGCACCATCAATAGATCGG1358510.9958011731382393No Hit
ATATGGGCCTCGTGCTCATCCTGGCAACAGGAACGCTGTAGGCACCATCA1297170.950838350663396No Hit
ACAACCTCAACTCATATGGGACTACCCCCTGAACTGTAGGCACCATCAAT1275270.9347854355639652No Hit
ACGATGCCAGCTAGCAATTGGGTGTAGCTACCTGTAGGCACCATCAATAG1177160.8628698419381601No Hit
ACGATGCCAGCTAGCAATTGGGTGTAGCCTGTAGGCACCATCAATAGATC1048480.7685461380571224No Hit
TAGTTACGTAGCCAATTGTGGAACTTTCTTGCTCTGTAGGCACCATCAAT950290.6965719036455658No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACCTGTAGGCACCATCAATA946540.6938231168134714No Hit
ACGATGCCAGCTAGCAATTGGGTGTAGCTACTGTAGGCACCATCAATAGA918180.6730349582646198No Hit
AAGTGGAGCCGTACCTGTTGGTTTGTCCCCTGTAGGCACCATCAATAGAT840700.6162413572644425No Hit
TTGTATGTAAGCGTATTACCGGTGGAGCTGTAGGCACCATCAATAGATCG790250.5792610117500008No Hit
ACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTCTGTAGGCACCATC750150.5498673178921393No Hit
CTATGTATGTAAGCGTATTACCGGTGGCTGTAGGCACCATCAATAGATCG722650.5297095477901147No Hit
TTTGCCAAAGATGTTTTCATTAATCAAGAACGAACTGTAGGCACCATCAA687560.5039882331399311No Hit
TTATAAGCATATGGTATATTATTGGATAAACTGTAGGCACCATCAATAGA623160.4567824006100988No Hit
ACGTAGCCAATTGTGGAACTTTCTTGCTACTGTAGGCACCATCAATAGAT580000.4251456966972484No Hit
TCGACATTTTGAACGCATATCGCAGTCCATGCTGCTGTAGGCACCATCAA549890.40307477096008604No Hit
TAACGATGCCAGCTAGCAATTGGGTGTAGCTACCTGTAGGCACCATCAAT543400.39831753721600816No Hit
ACTGAAGCTTATCCTTTGCTTGATGATTCGACTGTAGGCACCATCAATAG541770.3971227312063245No Hit
ATCAGTTATGGTTCCTTAGATCGTTAACCTGTAGGCACCATCAATAGATC540580.39625044951827326No Hit
AACGATGCCAGCTAGCAATTGGGTGTAGCTACCTGTAGGCACCATCAATA520060.38120908797305336No Hit
GTATGTATGTAAGCGTATTACCGGTGGCTGTAGGCACCATCAATAGATCG503820.36930500846553044No Hit
TAACGATGCCAGCTAGCAATTGGGTGTAGCCTGTAGGCACCATCAATAGA481090.3526436952139297No Hit
AACGATGCCAGCTAGCAATTGGGTGTAGCCTGTAGGCACCATCAATAGAT474790.3480257333360113No Hit
AGTGGAGCCGTACCTGTTGGTTTGTCCCCTGTAGGCACCATCAATAGATC456430.33456767300607765No Hit
TATAAGCATATGGTATATTATTGGATAAACTGTAGGCACCATCAATAGAT444970.32616738044719756No Hit
AGTTACGTAGCCAATTGTGGAACTTTCTTGCTACTGTAGGCACCATCAAT442720.324518108347941No Hit
TAACGATGCCAGCTAGCAATTGGGTGTAGCTACTGTAGGCACCATCAATA441600.32369713734742217No Hit
AACGATGCCAGCTAGCAATTGGGTGTAGCTACTGTAGGCACCATCAATAG440540.32292014693621685No Hit
TTTTGCCAAAGATGTTTTCATTAATCAAGAACGAACTGTAGGCACCATCA435020.3188739327193741No Hit
AATTCCGTAACCTGTTGAGTATCCGTCTGTAGGCACCATCAATAGATCGG408800.29965441518937086No Hit
ATGGGCCTCGTGCTCATCCTGGCAACAGGAACGCTGTAGGCACCATCAAT394280.2890111125755018No Hit
TTTTGAACGCATATCGCAGTCCATGCTGCTGTAGGCACCATCAATAGATC390850.28649688888641295No Hit
AAGTTCAAGGCGAAAGCCGAAAATTTTCAACTGTAGGCACCATCAATAGA389250.28532407317138603No Hit
TTTATGTATGTAAGCGTATTACCGGTGGCTGTAGGCACCATCAATAGATC362600.2657893614179694No Hit
AGTTATGGTTCCTTAGATCGTTAACCTGTAGGCACCATCAATAGATCGGA361220.2647778078637587No Hit
TTGCCAAAGATGTTTTCATTAATCAAGAACGAACTGTAGGCACCATCAAT359750.2637002834255777No Hit
TTATGGGCCTCGTGCTCATCCTGGCAACAGGAACGCTGTAGGCACCATCA351740.2578288747522244No Hit
ATGGTGCTGAAGCTTATGTAGCCTTCACTGTAGGCACCATCAATAGATCG348490.255446592831076No Hit
TTAAGTGGAGCCGTACCTGTTGGTTTGTCCCCTGTAGGCACCATCAATAG334090.24489125139583395No Hit
CTATGTATGTAAGCGTATTACCGGTGGAGCTGTAGGCACCATCAATAGAT327100.2397675127408102No Hit
AAATATGGGCCTCGTGCTCATCCTGGCAACAGGAACGCTGTAGGCACCAT318920.23377149239773523No Hit
TATGGGCCTCGTGCTCATCCTGGCAACAGGAACGCTGTAGGCACCATCAA318340.23334634670103802No Hit
TGCTTGGACTACATATGGTTGAGGGTTGTACTGTAGGCACCATCAATAGA313850.23005513260074378No Hit
TTTTTGAACGCATATCGCAGTCCATGCTGCTGTAGGCACCATCAATAGAT313740.22997450152033566No Hit
TGTATGTAAGCGTATTACCGGTGGCTGTAGGCACCATCAATAGATCGGAA312990.2294247441539168No Hit
TTATGTAAGTGGAGCCGTACCTGTTGGTTTGTCCCTGTAGGCACCATCAA308610.2262141611340307No Hit
ATGGTGCTGAAGCTTATGTAGCCTTCATTCATGCTGTAGGCACCATCAAT303270.22229988868512846No Hit
TTATGTATGTAAGCGTATTACCGGTGGAGTTCCTGTAGGCACCATCAATA277230.20321231292306577No Hit
ACAACCTCAACTCATATGGGACTACCCCCTGAATTCTGTAGGCACCATCA267680.19621206912399902No Hit
AATATGGGCCTCGTGCTCATCCTGGCAACAGGAACGCTGTAGGCACCATC262680.19254702001454No Hit
GCCCGGATAGCTCAGTCGGTAGAGCATTGGACCTGTAGGCACCATCAATA256990.1883761941279756No Hit
ATGGTGCTGAAGCTTATGTAGCCTTCCTGTAGGCACCATCAATAGATCGG251870.18462318383988954No Hit
TAGTGACGAAAAATAACAATACAGGACTCCTGTAGGCACCATCAATAGAT250890.18390483421443557No Hit
ATATCAGTTATGGTTCCTTAGATCGTTAACCTGTAGGCACCATCAATAGA250350.183509008910614No Hit
GTATGTATGTAAGCGTATTACCGGTGGAGCTGTAGGCACCATCAATAGAT232550.17046143408093983No Hit
ACTTGTATTTTTTCATATGTTCCTCCTCTGTAGGCACCATCAATAGATCG220940.16195119004877592No Hit
TTGTATGTAAGCGTATTACCGGTGGCTGTAGGCACCATCAATAGATCGGA216580.15875526722532765No Hit
GCTTGGGAACACCGCGTGTTGTTGGCCTCTGTAGGCACCATCAATAGATC210580.1543572082939768No Hit
ATCAGTTATGGTTCCTTAGATCGTTACTGTAGGCACCATCAATAGATCGG202120.14815594520077213No Hit
ATATGGGCCTCGTGCTCATCCTGGCAACAGGAACGACCCTGTAGGCACCA202030.14808997431680185No Hit
TTTAGTTACGTAGCCAATTGTGGAACTTTCTTGCTCTGTAGGCACCATCA201330.14757686744147758No Hit
ATGTAAGTGGAGCCGTACCTGTTGGTTTGTCCCTGTAGGCACCATCAATA200260.14679254693205335No Hit
AATTCCGTAACCTGTTGAGTATCCGTTCTGTAGGCACCATCAATAGATCG199010.1458762846546886No Hit
TAGTGACGAAAAATAACAATACAGGACTCACTGTAGGCACCATCAATAGA195890.14358929401038614No Hit
TTTATAAGCATATGGTATATTATTGGATAAACTGTAGGCACCATCAATAG181860.1333051662092441No Hit
TTATGTTAGTTACTTGTTCCCCGGATAGCTGTAGGCACCATCAATAGATC181250.1328580302178901No Hit
TAGTTACGTAGCCAATTGTGGAACTTTCTTGCTACTGTAGGCACCATCAA178920.13115011733288218No Hit
ATTATATCAGTTATGGTTCCTTAGATCGTTAACCTGTAGGCACCATCAAT178040.1305050686896174No Hit
TGTATGTAAGCGTATTACCGGTGGAGTTCCTGTAGGCACCATCAATAGAT176710.1295301656265013No Hit
AAACGATGCCAGCTAGCAATTGGGTGTAGCTCTGTAGGCACCATCAATAG176350.12926628209062024No Hit
ATGGTAGATGGGCTAGAAGAGCATGACATCTGTAGGCACCATCAATAGAT175930.12895841796542568No Hit
ACGGTTCCAATTCCGTAACCTGTTGAGTATCCGTCTGTAGGCACCATCAA175710.1287971558046095No Hit
AAATTAGAGTGCTTAAAGCAGGCTTCCTGTAGGCACCATCAATAGATCGG168010.12315298017604256No Hit
ATATGGGCCTCGTGCTCATCCTGGCAACAGGAACTGTAGGCACCATCAAT167300.12263254320249938No Hit
TATGTAAGTGGAGCCGTACCTGTTGGTTTGTCCCCTGTAGGCACCATCAA165000.12094662061214823No Hit
TTATGTATGTAAGCGTATTACCGGTGGACTGTAGGCACCATCAATAGATC164300.12043351373682395No Hit
ACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTACTGTAGGCACCAT163700.11999370784368887No Hit
ATATGTATGTAAGCGTATTACCGGTGGCTGTAGGCACCATCAATAGATCG162110.1188282222268809No Hit
TTGAACGCATATCGCAGTCCATGCTGCTGTAGGCACCATCAATAGATCGG159960.11725225110981352No Hit
ATGGGCCTCGTGCTCATCCTGGCAACAGGAACGACCCTGTAGGCACCATC159700.11706166855612166No Hit
ATATCAGTTATGGTTCCTTAGATCGTTACTGTAGGCACCATCAATAGATC159230.11671715393983251No Hit
TATGGTGCTGAAGCTTATGTAGCCTTCACTGTAGGCACCATCAATAGATC158450.11614540627875689No Hit
TTACGTAGCCAATTGTGGAACTTTCTTGCTCTGTAGGCACCATCAATAGA154670.11337462915200587No Hit
ATGTATGTAAGCGTATTACCGGTGGAGTTCCTGTAGGCACCATCAATAGA152940.11210652216013303No Hit
ATGGTGCTGAAGCTTATGTAGCCTTCATTCCTGTAGGCACCATCAATAGA150440.1102739976054035No Hit
ATAAGCATATGGTATATTATTGGATAAACTGTAGGCACCATCAATAGATC149830.1098268616140495No Hit
ATTATATCAGTTATGGTTCCTTAGATCGTTACTGTAGGCACCATCAATAG149820.10981953151583058No Hit
CTATGTAAGTGGAGCCGTACCTGTTGGTTTGTCCCCTGTAGGCACCATCA147750.10830220118451454No Hit
TGTAAGTGGAGCCGTACCTGTTGGTTTGTCCCTGTAGGCACCATCAATAG145920.10696079321045254No Hit
TTTATGTAAGTGGAGCCGTACCTGTTGGTTTGTCCCCTGTAGGCACCATC145560.1066969096745715No Hit
TTTACGTAGCCAATTGTGGAACTTTCTTGCTCTGTAGGCACCATCAATAG144950.10624977368321749No Hit
TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACCTGTAGGCACCATCAAT143390.10510627836106626No Hit
TATGTATGTAAGCGTATTACCGGTGGAGTTCCTGTAGGCACCATCAATAG138380.10143389915338832No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)