FastQCFastQC Report
Sat 23 Sept 2023
SRR21146245_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR21146245_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences109266905
Total Bases8.1 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAACTGTAGGCACCATCAA53519404.898043007624312No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAACTGTAGGCACCATCAAT17284431.581854084729498No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAACTGTAGGCACCATCA4198730.3842636523840407No Hit
GCATTTATCAGTTGGTGACTCTAGATAACCTAACTGTAGGCACCATCAAT3647890.3338513157300465No Hit
GTTTTATCCGGTAAAGCGAATGATTAGAGGTAACTGTAGGCACCATCAAT3630160.3322286835158368No Hit
CTGCAGTTAAAAAGCTCGTAGTTGGATCTTGAACTGTAGGCACCATCAAT2988880.2735393667460426No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAACTGTAGGCACCATCAAT2799740.25622945941408337No Hit
GTCCGACGATCCGCGCTACACTGACTGGCTCAGCGAACTGTAGGCACCAT2080800.19043277559659988No Hit
GTCCGACGATCATGGATTTTTGGAGCAGGAACTGTAGGCACCATCAATCC1992850.18238367783914078No Hit
TGCATTTATCAGTTGGTGACTCTAGATAACCTCAACTGTAGGCACCATCA1764890.16152100217353094No Hit
CTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGAACTGTAGGCACCATCAA1550190.14187186870535043No Hit
TGCATTTATCAGTTGGTGACTCTAGATAACCTAACTGTAGGCACCATCAA1525750.1396351438708729No Hit
CGGGCGTGGAATGCGAGTGCCTAGTGGGCCACAACTGTAGGCACCATCAA1359860.12445305374028852No Hit
GTCCGACGATCATGGATTTTTGGAGCAGGAACTGTAGGCACCATCAATCA1311300.12000889015754589No Hit
GTCCGACGATCATGGATTTTTGGAGCAGGAACTGTAGGCACCATCAATAC1290690.11812268316742384No Hit
TGCAGTTAAAAAGCTCGTAGTTGGATCTTGAACTGTAGGCACCATCAATC1279820.11712787142639391No Hit
AGTCCGACGATCATGGATTTTTGGAGCAGGAACTGTAGGCACCATCAATC1149120.10516633558898736No Hit
GTCCGACGATCATGGATTTTTGGAGCAGGAACTGTAGGCACCATCAATCG1115730.10211051553075472No Hit
GTCCGACGATCATGGATTTTTGGAGCAGGAACTGTAGGCACCATCAATCT1105840.1012053924287505No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)