FastQCFastQC Report
Sat 23 Sept 2023
SRR21146246_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR21146246_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences111711842
Total Bases8.3 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAACTGTAGGCACCATCAA21533831.9276228566708262No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAACTGTAGGCACCATCAAT7740220.6928737241661453No Hit
GTTTTATCCGGTAAAGCGAATGATTAGAGGTAACTGTAGGCACCATCAAT2678940.23980805902385888No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAACTGTAGGCACCATCAAT2557300.22891932978779456No Hit
GCATTTATCAGTTGGTGACTCTAGATAACCTAACTGTAGGCACCATCAAT2107230.18863085258230725No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAACTGTAGGCACCATCA1645470.1472959330488884No Hit
GTCCGACGATCATGGATTTTTGGAGCAGGAACTGTAGGCACCATCAATCC1589770.14230989047696482No Hit
GTCCGACGATCCGCGCTACACTGACTGGCTCAGCGAACTGTAGGCACCAT1178250.10547225602098656No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)