FastQCFastQC Report
Sat 23 Sept 2023
SRR21146247_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR21146247_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences106694097
Total Bases8 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAACTGTAGGCACCATCAA29122392.7295221402923535No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAACTGTAGGCACCATCAAT11962681.1212129195863574No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAACTGTAGGCACCATCA2098450.19667910962309376No Hit
CTGCAGTTAAAAAGCTCGTAGTTGGATCTTGAACTGTAGGCACCATCAAT1833480.1718445585607234No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAACTGTAGGCACCATCAAT1557290.14595840292832696No Hit
GCATTTATCAGTTGGTGACTCTAGATAACCTAACTGTAGGCACCATCAAT1234850.11573742453624214No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)