FastQCFastQC Report
Sat 23 Sept 2023
SRR21146250_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR21146250_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences101625018
Total Bases7.6 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAACTGTAGGCACCATCAA8901030.8758699555654691No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAACTGTAGGCACCATCAAT3732160.3672481514345217No Hit
GTCCGACGATCATGGATTTTTGGAGCAGGAACTGTAGGCACCATCAATCC1140880.11226369475280192No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)