FastQCFastQC Report
Sat 23 Sept 2023
SRR21308232.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR21308232.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences199597
Total Bases9.7 Mbp
Sequences flagged as poor quality0
Sequence length49
%GC65

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC2802914.042796234412341No Hit
ACTCCACGCATCGACCTGGTATTGCAGTACCTCCAGGAACGGTGCACCA3080.1543109365371223No Hit
TTACCACAGGGATAACTGGCTTGTGGCGGCCAAGCGTTCATAGCGACGT2620.13126449796339623No Hit
ACTCCACTGAGCGGCGTCCGGTGAGCTCTCGCTGGCAGATCGGAAGAGC2090.10471099265019013No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)