FastQCFastQC Report
Sat 1 Jul 2023
SRR2148107_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2148107_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41773959
Total Bases1.1 Gbp
Sequences flagged as poor quality0
Sequence length21-42
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCGAGCGCACGGGGTCGGCGGCGA7112281.7025630728464112No Hit
CCGAGCGCACGGGGTCGGCGGCGAT6127951.466930630156457No Hit
CCTCTAGCATTACCAGTATTAGAGGC1797690.4303374741187446No Hit
CCCGTCCTCGCCGCGCGGCGGCGG1472470.35248514511157536No Hit
ACCTCTAGCATTACCAGTATTAGAGGC1272030.304503099646361No Hit
GCCGAGCGCACGGGGTCGGCGGCGAT1192480.28546013558351024No Hit
TCGTCGCTCCGTCGCGGGGGCGGGG1018040.2437020632878009No Hit
CCGAGCGCCCGGGGTCGGCGGCGA995070.2382034223761267No Hit
CGTCGCTCCGTCGCGGGGGCGGGG886500.2122135467217747No Hit
CTCTAGCATTACCAGTATTAGAGGC886130.21212497479590098No Hit
CACCCCGTCTCCGCCCCCCGGCCC855920.20489319674010306No Hit
GTCGCTCCGTCGCGGGGGCGGGGAGCGG841780.20150831287022614No Hit
CCGCCTGGGAATACCGGGTGCTGTAGGCTT755410.18083275276829758No Hit
GAGGCCTACTTCACAAAGCGCCTTC705770.16894975168621199No Hit
GTCGCTCCGTCGCGGGGGCGGGGA646090.15466333942636368No Hit
CCGAGCGCACGGGGTCGGCGGCGATG628620.15048130822362324No Hit
TGCTAAGACCTCACCAGTCAAAGCGA628400.15042864383526589No Hit
AATACAAGCTTGGGCTGCAGGTCGAC572670.13708779673001548No Hit
CCCCGTCCTCGCCGCGCGGCGGCGG569860.13641512886054205No Hit
TGCTAAGACCTCACCAGTCAAAGCGAA558950.1338034539651844No Hit
CCGAGCGCCCGGGGTCGGCGGCGAT544360.13031084748275834No Hit
GGAGAGATCCTTCCGCAGGTTCAC475780.1138939213302718No Hit
CGTCGCTCCGTCGCGGGGGCGGGGA468050.11204348623026131No Hit

[OK]Adapter Content

Adapter graph