FastQCFastQC Report
Fri 30 Jun 2023
SRR2148111_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2148111_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35894196
Total Bases1 Gbp
Sequences flagged as poor quality0
Sequence length21-42
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAA524740.14619076577171417No Hit
AAAAAAAAAAAAAAAAAAAAAAA468490.130519708534494No Hit
ACGATTAAAGTCCTACGTGATCTGAGTTC451240.12571391764841314No Hit
TGCTAAGACCACACAAGTCAAAGCGAA436560.12162411995521505No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)