FastQCFastQC Report
Sat 1 Jul 2023
SRR2148112_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2148112_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34044349
Total Bases989.4 Mbp
Sequences flagged as poor quality0
Sequence length21-42
%GC65

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGGCGGGCGCCGGCGCGCCCCGCTCGCTCCGCCG1968020.5780753804397905No Hit
CCTCTAGCATTACTAGTATTAGAGGC1849270.5431944079764897No Hit
TGGGGGGCCGGGCCCCCCCTCCCACGGCG1792790.5266042831366815No Hit
TGCTAAGACCACACAAGTCAAAGCGAA1476480.4336931218746465No Hit
TGGGGGGCCGGGCCACCCCTCCCCCGGCG1473900.43293528685186494No Hit
ACCTCTAGCATTACTAGTATTAGAGGC1252930.3680287732921549No Hit
TGGGGGGCCGGGCCACCCCTCCCCAGGCG1127780.33126789999714784No Hit
TGGGGGGCCGGGCCCCCCCTCCCACGGCGC1115090.3275404091292801No Hit
TGGGGGGTCGGGCCACCCCTCCCACGGCG1024450.3009163136002395No Hit
TGGGGGGCCGGGCCACCCCTCCCAAGGCG968870.28459054981488996No Hit
TGGGGGGCCGGGCCACCCCTCCCCCGGCGC874000.2567239573298934No Hit
ACGATGCCGACTGGCGCTGCGGCGGCGTT744020.21854434637595802No Hit
TGGGGGGCCGGGTCACCCCTCCCACGGCG698730.20524111064658632No Hit
TGGGGGGCCGGGCCACCCCTCCCCAGGCGC659190.19362684832070076No Hit
TGGGGGGTCGGGCCACCCCTCCCACGGCGC655400.19251359454692465No Hit
TGGGGGGCCGGGACACCCCTCCCACGGCG626950.1841568478809802No Hit
TGGGGGGCCGGACCACCCCTCCCACGGCG610090.17920448412745388No Hit
GTGGGGGGCCGGGCCACCCCTCCCCCGGCGC601520.17668717941999715No Hit
TGGGGGGCCGGGCCACCCCTCCCAAGGCGC557310.16370117695597586No Hit
GTGGGGGGCCGGACCACCCCTCCCACGGCGC538430.15815546950244225No Hit
AACGATGCCGCCTGGCGATGCGGCGGCGTT537100.15776480261085327No Hit
ACGATGCCGACTGGCGCTGCGGCGGCG533320.15665448618212674No Hit
TGCTAAGACCACACAAGTCAAAGCGA530370.1557879693925121No Hit
GTGGGGGGCCGGGCCACCCCTCCCCCGGCG498120.146315031607742No Hit
CCGCCTGGGAATACCGGGTGCTGTAGGCTT486370.1428636511745312No Hit
AAGTGGGAGGCCCCCGGCGCCCCTCCGTCCCC481250.14135973050916614No Hit
TGGGGGGCCGGGGCACCCCTCCCACGGCG467040.13718576319376824No Hit
GTGGGGGGCCGGACCACCCCTCCCACGGCG443450.13025656622190074No Hit
AAGTGGGAGGCCCCCGGCGCCCCTCCGTCCC426230.12519845804659094No Hit
TGGGGGGCCGGGTCACCCCTCCCACGGCGC406160.1193032065321619No Hit
CACCTCTAGCATTACTAGTATTAGAGGC400970.11777872445145007No Hit
CCGGCGGGCGCCGGCGCGCCCCGCTCGCTCCGCC389960.11454470755190532No Hit
TGGGGGGCCGGGCCAACCCTCCCCAGGCG389390.11437727888408146No Hit
TGGGGGGCCGGGACACCCCTCCCACGGCGC387580.11384561943011452No Hit
CTCTAGCATTACTAGTATTAGAGGC373580.10973333636075697No Hit
TGGGGGGCCGGACCACCCCTCCCACGGCGC367870.10805611233746899No Hit
ACGATTAAAGTCCTACGTGATCTGAGTTC360120.10577966992407462No Hit
TGGGGGGCCGGGCCATCCCTCCCACGGCG350650.10299800416215918No Hit
AAACGCTGCCGACTGGCGATGCGGCGGCG349360.1026190866507684No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)