FastQCFastQC Report
Sat 1 Jul 2023
SRR2148113_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2148113_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36646046
Total Bases1 Gbp
Sequences flagged as poor quality0
Sequence length21-42
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGGGGCCGGGCCCCCCCTCCCACGGCG1583560.4321230181286134No Hit
TGGGGGGCCGGGCCACCCCTCCCCCGGCG1380580.3767336863573222No Hit
TGGGGGGCCGGGCCACCCCTCCCCAGGCG1107470.30220722857794813No Hit
TGGGGGGCCGGGCCCCCCCTCCCACGGCGC967930.2641294506916244No Hit
TGGGGGGCCGGGCCACCCCTCCCAAGGCG965260.2634008591267937No Hit
ACGATGCCGACTGGCGCTGCGGCGGCG923470.2519971731738807No Hit
TGGGGGGTCGGGCCACCCCTCCCACGGCG910410.24843335076313555No Hit
CTCGCCGCGCGGCGGCGGCGGCGGCGGG877810.2395374387730671No Hit
CCTCTAGCATTACTAGTATTAGAGGC814580.22228318984263679No Hit
TGGGGGGCCGGGCCACCCCTCCCCCGGCGC691540.18870794409852565No Hit
TGGGGGGCCGGGACACCCCTCCCACGGCG645610.17617453189902124No Hit
TGGGGGGCCGGGTCACCCCTCCCACGGCG618570.1687958368005105No Hit
ACCTCTAGCATTACTAGTATTAGAGGC595650.1625414103338734No Hit
CCGGCGGGCGCCGGCGCGCCCCGCTCGCTCCGCCG591380.16137620959161597No Hit
TGGGGGGCCGGGCCACCCCTCCCCAGGCGC542660.1480814601389738No Hit
TGGGGGGCCGGACCACCCCTCCCACGGCG542450.14802415518443654No Hit
TGGGGGGTCGGGCCACCCCTCCCACGGCGC525090.14328694560935715No Hit
AAACGCTGCCGACTGGCGATGCGGCGGCG513630.1401597323760386No Hit
CCGCCTGGGAATACCGGGTGCTGTAGGCTT508080.13864524429183983No Hit
ACGATGCCGACTGGCGCTGCGGCGGCGTT505430.1379221103417269No Hit
TGGGGGGCCGGGCCACCCCTCCCAAGGCGC493320.13461752463007878No Hit
AACGATGCCGCCTGGCGATGCGGCGGCG478010.1304397205635773No Hit
ACGATTAAAGTCCTACGTGATCTGAGT448620.12241975573572111No Hit
TGGGGGGCCGGGGCACCCCTCCCACGGCG448460.12237609481797844No Hit
GGCGCGCCCCGCTCGCTCCGCCGTCGC445490.1215656390323802No Hit
TGGGGGGCCGGGCCAACCCTCCCCAGGCG431120.11764434285761688No Hit
GTGGGGGGCCGGGCCACCCCTCCCCCGGCG389590.10631160589603583No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)