FastQCFastQC Report
Sat 1 Jul 2023
SRR2148114_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2148114_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32371890
Total Bases929.6 Mbp
Sequences flagged as poor quality0
Sequence length21-42
%GC64

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGGGGCCGGGCCCCCCCTCCCACGGCG2293050.7083460372563974No Hit
TGGGGGGCCGGGCCACCCCTCCCCCGGCG1288030.3978853258181712No Hit
TGGGGGGCCGGGCCACCCCTCCCAAGGCG1271250.3927018162980289No Hit
TGGGGGGTCGGGCCACCCCTCCCACGGCG1211990.3743958106863702No Hit
TGGGGGGCCGGGCCACCCCTCCCCAGGCG1206270.3726288455817686No Hit
TGGGGGGCCGGGCCCCCCCTCCCACGGCGC1205560.37240951949361006No Hit
ACGATGCCGACTGGCGCTGCGGCGGCG1147190.3543784437671078No Hit
TGGGGGGCCGGACCACCCCTCCCACGGCG959480.2963929507977446No Hit
TGGGGGGCCGGGTCACCCCTCCCACGGCG848960.2622522194410027No Hit
TGGGGGGCCGGGACACCCCTCCCACGGCG715560.22104362766585456No Hit
CCGCCTGGGAATACCGGGTGCTGTAGGCTT702880.2171266490773322No Hit
TGGGGGGTCGGGCCACCCCTCCCACGGCGC679240.20982401707160134No Hit
TGGGGGGCCGGGCCACCCCTCCCCCGGCGC643190.19868781217284504No Hit
AAACGCTGCCGACTGGCGATGCGGCGGCG626460.19351974815186881No Hit
TGGGGGGCCGGGCCACCCCTCCCAAGGCGC571820.17664090666315743No Hit
CCTCTAGCATCACTAGTATTAGAGGC551170.17026191550755918No Hit
TGGGGGGCCGGGCCACCCCTCCCCAGGCGC549100.16962247184208273No Hit
TGGGGGGCCGGGGCACCCCTCCCACGGCG535520.16542747426857066No Hit
AACGATGCCGCCTGGCGATGCGGCGGCG503120.15541879080893947No Hit
CTCGCCGCGCGGCGGCGGCGGCGGCGGG482720.14911702714917172No Hit
CCGGCGGGCGCCGGCGCGCCCCGCTCGCTCCGCCG473980.14641715389493787No Hit
TGGGGGGCCGGGCCAACCCTCCCCAGGCG450760.13924426408220217No Hit
TGGGGGGCCGGGTCACCCCTCCCACGGCGC446300.13786652555658627No Hit
TGGGGGGCCGGACCACCCCTCCCACGGCGC442970.1368378553121242No Hit
TGGGGGGCCGGGCCACCCCTCCCATGGCG431230.1332112521079245No Hit
TGGGGGGCCGGGCCACCCCTCCCACGACG419050.12944872851106315No Hit
TGGGGGGCCGGGCCATCCCTCCCACGGCG418810.12937459011506589No Hit
TGGGGGGGCGGGCCACCCCTCCCACGGCG382360.11811482122298081No Hit
TGGGGGGCCGGGCCCCCCCTCCCACGGCC373170.11527593847625209No Hit
TGGGGGGCCGGGACACCCCTCCCACGGCGC366550.11323095438666078No Hit
ACGATGCCGACTGGCGCTGCGGCGGCGTT352160.1087857397266579No Hit
AAGTGGGAGGCCCCCGGCGCCCCTCCGTCCCC329920.10191558169757775No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)