FastQCFastQC Report
Mon 25 Sept 2023
SRR22382755_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR22382755_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46802070
Total Bases3.5 Gbp
Sequences flagged as poor quality0
Sequence length76
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT629300.13445986470256552No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCCAACCTATCTCGTATG554560.11849048557040318TruSeq Adapter, Index 2 (97% over 36bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)