FastQCFastQC Report
Mon 25 Sept 2023
SRR22382760_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR22382760_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56183057
Total Bases4.2 Gbp
Sequences flagged as poor quality0
Sequence length76
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA989850.176183008340041No Hit
GGCGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA641960.11426220541897535No Hit
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT615340.10952412219221179No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)