FastQCFastQC Report
Mon 25 Sept 2023
SRR22382769_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR22382769_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42571466
Total Bases3.2 Gbp
Sequences flagged as poor quality0
Sequence length76
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTAGTTCCATCTCGTATG1453800.3414963440535499TruSeq Adapter, Index 10 (97% over 38bp)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT888760.20876894396824391No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)