FastQCFastQC Report
Mon 25 Sept 2023
SRR22750508_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR22750508_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30103936
Total Bases1.5 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTCGACTGGAATTCTCG407160.13525141695756993No Hit
CCCCGGGGGGGGATGCGTGCATTTATCAGATCTCCTGGAATTCTCGGGTG380120.1262692028045768No Hit
CCCCGGGGGGGGATGCGTGCATTTATCAGATGCACTGGAATTCTCGGGTG376380.12502684034406664No Hit
CCCCGGGGGGGGATGCGTGCATTTATCAGACTCCTGGAATTCTCGGGTGC345400.11473582723534889No Hit
CCCCGGGGGGGGATGCGTGCATTTATCAGATTCCCTGGAATTCTCGGGTG327630.10883294463554533No Hit
CCCCGGGGGGGGATGCGTGCATTTATCAGAACCCTGGAATTCTCGGGTGC310360.1030961532737779No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)