FastQCFastQC Report
Mon 25 Sept 2023
SRR23021501_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR23021501_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60304439
Total Bases4.5 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGGTATCGAGATCGGA810160.13434500236375635No Hit
TTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGTAATCGAGATCGGA791680.13128055133719094No Hit
TTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGTTATCGAGATCGGA786300.13038841137382937No Hit
TTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGATATCGAGATCGGA757000.12552973090422084No Hit
TTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTTGGGGTATCGAGATCGG655920.10876811241043134No Hit
TTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTTGGGTAATCGAGATCGG643250.10666710621418764No Hit
TCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGGTATCGAGATCGGAA632700.10491764959458458No Hit
TTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTTGGGTTATCGAGATCGG625550.10373199889978249No Hit
TCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGTTATCGAGATCGGAA616150.10217324134297974No Hit
TCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGTAATCGAGATCGGAA610400.10121974602897807No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)