FastQCFastQC Report
Mon 25 Sept 2023
SRR23021502_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR23021502_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72205143
Total Bases5.4 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGGTATCGAGATCGGA874610.1211284908057034No Hit
TTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGTAATCGAGATCGGA869250.12038616141235257No Hit
TTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGTTATCGAGATCGGA864050.11966599110537043No Hit
TTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGATATCGAGATCGGA799530.11073033952719961No Hit
TTTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGGTATCGAGATCGG756550.10477785495141252No Hit
TTTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGTAATCGAGATCGG755870.10468367883434562No Hit
TTTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGATATCGAGATCGG751750.10411308236035208No Hit
TTTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGTTATCGAGATCGG738130.10222679013321806No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)