FastQCFastQC Report
Mon 25 Sept 2023
SRR23021504_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR23021504_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61225059
Total Bases4.5 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGGTATCGAGATCGGA925090.15109662858797734No Hit
TTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGTTATCGAGATCGGA904760.14777609279233198No Hit
TTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGTAATCGAGATCGGA901570.1472550643030005No Hit
TTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGATATCGAGATCGGA856980.13997209867939858No Hit
TCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGGTATCGAGATCGGAA758240.1238447152823487No Hit
TCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGTTATCGAGATCGGAA746550.12193536636689889No Hit
TCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGATATCGAGATCGGAA722150.11795007008486508No Hit
TCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGTAATCGAGATCGGAA721970.11792067035819435No Hit
TTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGGAATCGAGATCGGA649630.10610524687285315No Hit
TTTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGGTATCGAGATCGG629950.10289087675685211No Hit
TTTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGATATCGAGATCGG628640.10267691207941505No Hit
TTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGAAATCGAGATCGGA624480.10199745172969127No Hit
TTTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTGGGTAATCGAGATCGG612380.10002113677015811No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)