FastQCFastQC Report
Fri 30 Jun 2023
SRR2392991_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2392991_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5443564
Total Bases821.9 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTATCTCAGTCCCAGTGT609861.1203321941286994No Hit
CTGCATTCTCACTCCCGCACCCTCCACTGCTGAATTACTTCGCAGCTTCG496540.9121597541610608No Hit
CCCGACTTTCGTCCCTGCTTGACTTGTAGGTCTCGCAGTCAAGCTCCCTT455670.8370802657964524No Hit
CCCTGCAGTACTCTAGTCTGCCCGTATCGCCCGCACGCCCACAGTTAAGC439070.8065855384450334No Hit
CCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTATCTCAGTCCCAGTGTG437430.8035728063452547No Hit
CTCCCCTGCAGTACTCTAGTCTGCCCGTATCGCCCGCACGCCCACAGTTA404120.7423812781479193No Hit
CGCCACTCGAGTACCCCGAAGGGCCTTTCCGTTCGACTTGCATGTGTTAA397910.7309733108676595No Hit
CCGACTTTCGTCCCTGCTTGACTTGTAGGTCTCGCAGTCAAGCTCCCTTG384840.7069633056578375No Hit
CGGGAACGTATTCACCGCAGCGTTGCTGATCTGCGATTACTAGCGACTCC358970.6594392938155959No Hit
CTTGGAATAGGTTTCCCGCTTAGATGCTTTCAGCGGTTATCCTGTCCGAA339900.624407097996827No Hit
CTGGACATAAGGGGCATGATGACTTGACGTCATCCCCACCTTCCTCCGAG263020.48317609566085745No Hit
CTCCGCTTCGGGTCCAGAACACGCCACTATGGGCGCCCTATTCAGACTCG255280.4689574697753164No Hit
GGGGTCTTTTCGTCCTGCCGCGCGTAACGAGCATCTTTACTCGTAGTGCA241370.4434043578802417No Hit
CCGGGGTCTTTTCGTCCTGCCGCGCGTAACGAGCATCTTTACTCGTAGTG238990.4390322222720262No Hit
GTCCTGCCGCGCGTAACGAGCATCTTTACTCGTAGTGCAATTTCGCCGAG238660.4384260017885342No Hit
CCCACAACCCCGCACACACAACCCCTACCAGGTATCACATGCATGCGGTT237970.43715844986850527No Hit
CCGCTACATTGTCGGCGCACAATCACTTGACCAGTGAGCTATTACGCACT237610.4364971184319685No Hit
CTGCAGTACTCTAGTCTGCCCGTATCGCCCGCACGCCCACAGTTAAGCTG231240.4247952260688035No Hit
CCTGCATTCTCACTCCCGCACCCTCCACTGCTGAATTACTTCGCAGCTTC211800.38908332849581634No Hit
CACCCGTTCGCCACTCGAGTACCCCGAAGGGCCTTTCCGTTCGACTTGCA204230.375176998010862No Hit
GGGTGACCTTATCCCTCTAAAAGGGTAAGAAACCTGGTCTTGGAATAGGT201070.36937197762348345No Hit
CCTGGACATAAGGGGCATGATGACTTGACGTCATCCCCACCTTCCTCCGA194780.35781704780177104No Hit
CTCCGTGCGCAGTTCGCTATGCCTCTACTTGGATCTCTCGGTCCCGCGAA194100.35656786619942377No Hit
CTCTTCCTACGGGTACTGAGATGTTTCACTTCCCCGCGTTTCCTCCCAAA184990.33983250679150645No Hit
CGACTTTCGTCCCTGCTTGACTTGTAGGTCTCGCAGTCAAGCTCCCTTGT180020.3307024589037623No Hit
CGGGGTCTTTTCGTCCTGCCGCGCGTAACGAGCATCTTTACTCGTAGTGC174640.3208192279910735No Hit
CCCCGGGGTACCTTTTATCCGTTGAGCGACACCCCTTCCACTCAGAGGTG171580.3151979107805107No Hit
CTGTGGGTGACCTTATCCCTCTAAAAGGGTAAGAAACCTGGTCTTGGAAT170120.3125158443990003No Hit
CCCCTGCAGTACTCTAGTCTGCCCGTATCGCCCGCACGCCCACAGTTAAG152320.279816678925792No Hit
GTCGCTTCTCACTGGTCTCTGCGACCTCGTTCAGCTCACGGAGCAAGTCC149790.27516898855235283No Hit
GTACAAGGCCCGGGAACGTATTCACCGCAGCGTTGCTGATCTGCGATTAC149390.2744341758450897No Hit
GTGCGCAGTTCGCTATGCCTCTACTTGGATCTCTCGGTCCCGCGAACAAG149100.27390143663232397No Hit
GGCGTCGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTG143220.26309968983555626No Hit
GCCTGCATTCTCACTCCCGCACCCTCCACTGCTGAATTACTTCGCAGCTT139410.25610059879887515No Hit
CCCGGGGTACCTTTTATCCGTTGAGCGACACCCCTTCCACTCAGAGGTGC136510.2507732066712176No Hit
CTCCGACTTCATGGGGTCGAGTTGCAGACCCCAATCCGAACTGAGACCAG136140.2500935049169992No Hit
GTTCGCCACTCGAGTACCCCGAAGGGCCTTTCCGTTCGACTTGCATGTGT135660.24921172966828348No Hit
CCCGACTTACCCTGGGAGGACTAGCCTGGCCCAGGAACCCTTGGTCATTC135460.24884432331465195No Hit
GCCGTGTGTGAACTCACTAGAGGCTTTTCTTGGCAGCATAGGATCACTGA131450.24147782592433925No Hit
CCCGCGTTTCCTCCCAAAGCCTATATATTCAGCAGTGGGTAACACGACAT130940.2405409397225788No Hit
CTCCCACAACCCCGCACACACAACCCCTACCAGGTATCACATGCATGCGG129230.23739961539902904No Hit
CACTCGAGTACCCCGAAGGGCCTTTCCGTTCGACTTGCATGTGTTAAGCA126580.23253148121341094No Hit
GGGGCCTTAGCCGGCGATCTGGGCTGTTTCCCTCTCGACGTACGGAGCTT121060.22239106585318003No Hit
CTAGAGAGTATTTAGGCTTACCGGGTGGTCCCGGCAGATTCACAGCAGAT120020.22048055281429593No Hit
CTACGGGCTTGCTCCGGTATAACCACTAACCGGTACAGCTACCTTCCTGC119930.22031521995516173No Hit
CGTTGAGCGACACCCCTTCCACTCAGAGGTGCCGGATCACTAGTCCCGAC119500.2195252962948539No Hit
CCCCGCTACATTGTCGGCGCACAATCACTTGACCAGTGAGCTATTACGCA119130.21884559454063549No Hit
CGCTACATTGTCGGCGCACAATCACTTGACCAGTGAGCTATTACGCACTC118990.2185884100930934No Hit
CTCCGGTTACCAAGCGTGCAATGTGGGTTGTGTGGGTGGCCTCGGCGCTT113620.20872354949808616No Hit
CTCGAGTACCCCGAAGGGCCTTTCCGTTCGACTTGCATGTGTTAAGCACG112770.2071620724951521No Hit
CGCTTCTCACTGGTCTCTGCGACCTCGTTCAGCTCACGGAGCAAGTCCGG112640.20692325836529157No Hit
CGGGCCGTGTGTGAACTCACTAGAGGCTTTTCTTGGCAGCATAGGATCAC109040.20030994399992358No Hit
CCGTTCGCCACTCGAGTACCCCGAAGGGCCTTTCCGTTCGACTTGCATGT106220.19512951441371865No Hit
GGCAGCTCCCCGAGGCTTATCGCAGCCTCCTACGTCCTTCTTCGGCTTCT104500.1919698197724873No Hit
CACTGGTCTCTGCGACCTCGTTCAGCTCACGGAGCAAGTCCGGTCACCAA104400.1917861165956715No Hit
CCCCTACCCATCCATGCCACTGCCCCGAAGGGAATGTATTGCATGAATGC104200.19141871024203996No Hit
GTGTGAACTCACTAGAGGCTTTTCTTGGCAGCATAGGATCACTGAATTCG103610.19033486149882686No Hit
CACCGGTGTTCCTCCTGATATCTGCGCATTCCACCGCTACACCAGGAATT101070.18566880080770615No Hit
CTGGTCTCTGCGACCTCGTTCAGCTCACGGAGCAAGTCCGGTCACCAAGC98090.18019444613859595No Hit
GTCTTTTCGTCCTGCCGCGCGTAACGAGCATCTTTACTCGTAGTGCAATT96220.17675919673214094No Hit
CTCGCAGTCAAGCTCCCTTGTGCACTTGCACTCAACACCTGATTGCCGTC95880.17613460593096728No Hit
GTCGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCT94670.17391179749149638No Hit
CTTTTATCCGTTGAGCGACACCCCTTCCACTCAGAGGTGCCGGATCACTA94280.17319535510191486No Hit
CTCACTGGTCTCTGCGACCTCGTTCAGCTCACGGAGCAAGTCCGGTCACC92020.16904366330587828No Hit
CTCCCCTACCCATCCATGCCACTGCCCCGAAGGGAATGTATTGCATGAAT91340.16779448170353098No Hit
CTTCCTACGGGTACTGAGATGTTTCACTTCCCCGCGTTTCCTCCCAAAGC89020.16353256800140495No Hit
CGTGTGTGAACTCACTAGAGGCTTTTCTTGGCAGCATAGGATCACTGAAT87980.16162205496252088No Hit
CCGCGAGTCACCTCGGATTGCCGTTAGCAATCACCCTGCTCTGTGAAGTC87010.15984013414740783No Hit
CCGGGAACGTATTCACCGCAGCGTTGCTGATCTGCGATTACTAGCGACTC85930.15785613983779745No Hit
CCCGCGAGTCACCTCGGATTGCCGTTAGCAATCACCCTGCTCTGTGAAGT85630.1573050303073501No Hit
CCACAACCCCGCACACACAACCCCTACCAGGTATCACATGCATGCGGTTT83730.15381466994785034No Hit
GGTGACCTTATCCCTCTAAAAGGGTAAGAAACCTGGTCTTGGAATAGGTT81340.14942416402195327No Hit
CGTCGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCC80340.1475871322537955No Hit
CTCAGCGTCAGTTACTGCCCAGAGACCCGCCTTCGCCACCGGTGTTCCTC80150.1472380962178455No Hit
GTGACCTTATCCCTCTAAAAGGGTAAGAAACCTGGTCTTGGAATAGGTTT79260.14560313794418508No Hit
CACCGTTTACGGCGTGGACTACCAGGGTATCTAATCCTGTTCGCTACCCA78620.14442743761256413No Hit
CGGCGGTGTCCTACTCTTCCGTTCCGTGTCGAGAACAGTACCATCGGCGC77290.14198418536091428No Hit
CCCATTCGGAGATCCTCGGATCAAAGCTCGGTTGGCAGCTCCCCGAGGCT76600.14071663344088542No Hit
CTTCTCACTGGTCTCTGCGACCTCGTTCAGCTCACGGAGCAAGTCCGGTC76110.1398164878744881No Hit
CGTCCTGCCGCGCGTAACGAGCATCTTTACTCGTAGTGCAATTTCGCCGA75310.1383468624599619No Hit
AGAGTATTTAGGCTTACCGGGTGGTCCCGGCAGATTCACAGCAGATTCCA75010.13779575292951457No Hit
CTCAGTCCCAGTGTGGCCGGTCACCCTCTCAGGCCGGCTACCCGTCGTCG74850.13750182784660933No Hit
GTCCCGACTTACCCTGGGAGGACTAGCCTGGCCCAGGAACCCTTGGTCAT74590.1370241995868883No Hit
CCCGCTACATTGTCGGCGCACAATCACTTGACCAGTGAGCTATTACGCAC73320.13469116924132793No Hit
CCCGTTCGCCACTCGAGTACCCCGAAGGGCCTTTCCGTTCGACTTGCATG71030.13048436649224662No Hit
CCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTATCTCAGTCCCAGTGTGG69720.12807785487595993No Hit
CTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTG69580.12782067042841785No Hit
CCCTGCTTGACTTGTAGGTCTCGCAGTCAAGCTCCCTTGTGCACTTGCAC69460.12760022661623893No Hit
CCTGCAGTACTCTAGTCTGCCCGTATCGCCCGCACGCCCACAGTTAAGCT68850.12647963723766267No Hit
CTCGTGCTGGGTTTCCCCATTCGGAGATCCTCGGATCAAAGCTCGGTTGG68280.12543252912981276No Hit
GTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTC67560.12410986625673916No Hit
GTCCTACTCTTCCGTTCCGTGTCGAGAACAGTACCATCGGCGCTGAGAGG67350.12372408958542602No Hit
CACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGGA67110.12328320196106815No Hit
CTGAAAGAGGTTTACAACCCGAAGGCCGTCATCCCTCACGCGGCGTCGCT66480.12212587194712875No Hit
GGCACATGGTTTCAGGTACTATTTCACTCCCCTCCCGGGGTACTTTTCAC66330.12185031718190509No Hit
CTACTCTTCCGTTCCGTGTCGAGAACAGTACCATCGGCGCTGAGAGGCTT65910.12107876383927883No Hit
GGCCATTGTAGCATGTGTGAAGCCCTGGACATAAGGGGCATGATGACTTG65210.11979284160156839No Hit
CCTACTCTTCCGTTCCGTGTCGAGAACAGTACCATCGGCGCTGAGAGGCT65120.11962750874243418No Hit
CCGGTTACCAAGCGTGCAATGTGGGTTGTGTGGGTGGCCTCGGCGCTTTC64710.1188743257174895No Hit
TGTGAACTCACTAGAGGCTTTTCTTGGCAGCATAGGATCACTGAATTCGC64560.11859877095226584No Hit
CTTGGTCATTCGGCGGGCAAGTTTCTCACTTGCCTGTCGCTACTCATGCC64330.11817625364558954No Hit
CAGGCACTGTCCCTGGACCGGATATACGGTCCGAGGTTAGAGGTTCAATA63710.11703729394933171No Hit
GGCGGTGTCCTACTCTTCCGTTCCGTGTCGAGAACAGTACCATCGGCGCT62770.11531048408726342No Hit
CCCGGGGTCTTTTCGTCCTGCCGCGCGTAACGAGCATCTTTACTCGTAGT62680.11514515122812922No Hit
GTCCTGTGCATGTCAAACCCAGGTAAGGTTCTTCGCGTTGCATCGAATTA61190.11240797389357414No Hit
CCCGTCAATTCCTTTGAGTTTTAGTCTTGCGACCGTACTCCCCAGGCGGG61180.11238960357589256No Hit
CTCCCACCTATCCTACACAAACCGAACCAAACGCCAATACCAAGCTATAG60750.11159967991558471No Hit
CTCGACGTACGGAGCTTCTCCCCCGCCGTCTCACTGCCGCGCTCTAACTT60500.11114042197354528No Hit
CCCGTCGTCGCCTTGGTGGGCCATTACCCCACCAACAAGCTGATAGGCCG59970.11016679513642165No Hit
GTCAATTCCTTTGAGTTTTAGTCTTGCGACCGTACTCCCCAGGCGGGGTA59390.10910131671089014No Hit
CTTTTCGTCCTGCCGCGCGTAACGAGCATCTTTACTCGTAGTGCAATTTC58520.10750309907259288No Hit
GGCAGGCGTCAGTCCGTATACATCGTCTTGCGACTTCGCACGGACCTGTG57710.1060151033403851No Hit
GCGGTGTCCTACTCTTCCGTTCCGTGTCGAGAACAGTACCATCGGCGCTG57600.10581302984588774No Hit
CCCACGCTTTCGCTCCTCAGCGTCAGTTACTGCCCAGAGACCCGCCTTCG56740.10423318252527204No Hit
CGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTA54860.10077956280113544No Hit
CTTCGCCACCGGTGTTCCTCCTGATATCTGCGCATTCCACCGCTACACCA54840.1007428221657723No Hit
CATGGTTTCAGGTACTATTTCACTCCCCTCCCGGGGTACTTTTCACCATT54760.10059585962431965No Hit
CAAGGCCCGGGAACGTATTCACCGCAGCGTTGCTGATCTGCGATTACTAG54730.10054074867127491No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)