FastQCFastQC Report
Mon 25 Sept 2023
SRR24044795_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR24044795_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58412820
Total Bases4.4 Gbp
Sequences flagged as poor quality0
Sequence length76
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCGGGGCCCGGTGGGGGGCGGGGCGGACTGTAAAAAAAAAAAAAAAGA1573650.26940147727844677No Hit
GGCCGGGGCCCGGTGGGGGGCGGGGCGGACTGTAAAAAAAAAAAAAAAGA1211100.2073346227763015No Hit
GGCGGGGCCCGGTGGGGGGCGGGGCGGACTGTAAAAAAAAAAAAAAAGAT1131620.19372802066395697No Hit
GGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAG943020.16144058787095025No Hit
GGGCGGGGCCCGGTGGGGGGCGGGGCGGACTGTCCAAAAAAAAAAAAAAA809070.13850897799489909No Hit
GGGCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCAAAAAAAAAAAAAAAG791920.13557297867146287No Hit
GGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAG781060.13371379775877967No Hit
GGCGGGGCCCGGTGGGGGGCGGGGCGGACTGTCCAAAAAAAAAAAAAAAG722560.12369887295288946No Hit
GCGGGGGCCCGGTGGGGGGCGGGGCGGACTGTCCAAAAAAAAAAAAAAAG707800.12117203038648024No Hit
GCGCGGGGCCCGGTGGGGGGCGGGGCGGACTGTAAAAAAAAAAAAAAAGA654700.11208156017805682No Hit
GGGCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGAAAAAAAAAAAAAAA646010.11059387305731858No Hit
GGCCGGGGCCCGGTGGGGGGCGGGGCGGACTGTCCAAAAAAAAAAAAAAA641250.10977898344918119No Hit
GGCGGGGCCCGGTGGGGGGCGGGGCGGACTGTCAAAAAAAAAAAAAAAGA611150.10462600504478298No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)