FastQCFastQC Report
Mon 25 Sept 2023
SRR24044802_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR24044802_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59947723
Total Bases4.5 Gbp
Sequences flagged as poor quality0
Sequence length76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAG1018040.16982129579800723No Hit
GGGCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCAAAAAAAAAAAAA881020.14696471457306226No Hit
GGGCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCAAAAAAAAAAAAAAAG873070.14563855911591506No Hit
GGGCGGGGCCCGGTGGGGGGCGGGGCGGACTGTAAAAAAAAAAAAAAAGA847420.14135983113153439No Hit
GGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAG823390.1373513385987988No Hit
GGGCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGAAAAAAAAAAAAAAA763490.12735929936821788No Hit
GGGCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCAAAAAAAAAAAAAA624860.10423415081169973No Hit
GGCCCCCGAATCCGGAGTGGCGGAGATGGGCGCCGAAAAAAAAAAAAAAA615530.1026777947846326No Hit
GGCCGGGGCCCGGTGGGGGGCGGGGCGGACTGTAAAAAAAAAAAAAAAGA612930.10224408356594296No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)