FastQCFastQC Report
Mon 25 Sept 2023
SRR24451161.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR24451161.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14352953
Total Bases408.6 Mbp
Sequences flagged as poor quality0
Sequence length1-132
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATAGATGGATACGAATAAGGCGTC4143772.8870504905854566No Hit
A3881132.704063756078627No Hit
ATTATAGATGGATACGAATAAGGCGTC3110152.166906001852023No Hit
AATATAGATGGATACGAATAAGGCGTC2983602.0787359925166617No Hit
AAAATATAGATGGATACGAATAAGGCGTC2522891.757749781525795No Hit
ATAGATGGATACGAATAAGGCGTC2498801.740965778958518No Hit
AA2386981.6630584660870835No Hit
AATAGATGGATACGAATAAGGCGTC2167781.5103372804188795No Hit
ATATATAGATGGATACGAATAAGGCGTC2036391.4187951427138374No Hit
ATCAATATAGATGGATACGAATAAGGCGTC1286790.8965332778557834No Hit
ATTGTGGCGTCGCTGAACCATA1261860.8791640298689753No Hit
AATTCCAGGGGGCATGCCTGTTTGAGCGTCATTT1187890.827627596913332No Hit
ATCTATGCCGACTAGGGATCGGGTGGTG1153600.8037370428231737No Hit
ATTGACCTCAAATCAGGTAGGAGTACCCGCTGAA1039870.7244989933430424No Hit
ATTAGATGGATACGAATAAGGCGTC824050.5741327237677152No Hit
ATTTTGATGATTCATAATAACTTTTCGAATCGCA814150.5672351884660948No Hit
AATTCCAGGGGGCATGCCTGTTTGAGCGTCATT774150.5393663589645978No Hit
ATCCAGGGGGCATGCCTGTTTGAGCGTCATT753510.5249860429418253No Hit
ACTATGCCGACTAGGGATCGGGTGGTG701290.4886032860276209No Hit
AAGATGGATACGAATAAGGCGTC665930.46396724074829754No Hit
AATAAATCATTTGTATACGACTTAGAT657420.4580381472718541No Hit
ATGTGGCGTCGCTGAACCATA526680.3669488780462111No Hit
ATTGCTCGAATATATTAGCATGGAATAATAGAAT517840.3607898667263803No Hit
ACAATATAGATGGATACGAATAAGGCGTC512200.35686036176666924No Hit
ATTTGCTCGAATATATTAGCATGGAATAATAGAAT494620.3446120112007613No Hit
ATATAGATGGATACGAATAAGGCGTCC486000.3386062784431887No Hit
AACTATGCCGACTAGGGATCGGGTGGTG480120.33450956050646863No Hit
ATCAGGCATTGCCGCGAAGCTACCATCCGCTGGA470210.3276050579974727No Hit
AAATAGATGGATACGAATAAGGCGTC449930.3134755614402137No Hit
AATACTGCCAGCTGGGACTGAGGACTGCGACG439460.30618089531819687No Hit
AACGCGCGCTACACTGACGGAGCCAGCG430460.29991040868036006No Hit
AACCATACGCGAAACTCAGGTGCTGCAATCT415440.28944566320254794No Hit
AGCCAAGGACGTTTTCATTAATCAAGAACG410910.2862895182615034No Hit
ATAGCCTGTGGGAATACTGCCAGCTGGGACTGAGG407670.2840321430718822No Hit
AAATATAGATGGATACGAATAAGGCGTC378080.2634161764481497No Hit
ATTGACCTCAAATCAGGTAGGAGTACCCGCTGAACT366350.2552436421968357No Hit
AATATAGATGGATACGAATAAGGCGTCC352960.24591455152120958No Hit
ATTGTGGCGTCGCTGAACCATAGCAGGCTAGC352860.2458448794474559No Hit
ATTGTGGCGTCGCTGAACCATAGCAGGCTAGCA339130.236278903721067No Hit
ATAGATGGATACGAATAAGGCGTCC336970.23477398692798618No Hit
ATAATATAGATGGATACGAATAAGGCGTC327580.22823177920250978No Hit
AATATATAGATGGATACGAATAAGGCGTC324520.22609981374564522No Hit
ATTATAGATGGATACGAATAAGGCGTCC320950.22361252071263663No Hit
ACTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCG320070.2229994064636037No Hit
ATCCGGAGATGGGGTCTTATGGCTGGAAGAGGCCAGC318760.22208670229742966No Hit
ATTTCCATCTAAAGCTAAATATT316400.22044244135684135No Hit
ATTTGTGGCGTCGCTGAACCATA305720.21300146387994165No Hit
ATCCACGACTAACCTTACCATATTTTGAATATT301710.21020761372241656No Hit
ATTGTGGCGTCGCTGAACCATAG297950.20758794374927583No Hit
ATCCGGAGATGGGGTCTTATGGCTGGAAGAGGCCAGCA297800.20748343563864521No Hit
AAAATATAGATGGATACGAATAAGGCGTCC281010.19578549445539187No Hit
ATTCCAGGGGGCATGCCTGTTTGAGCGTCATT262770.18307730820270923No Hit
ATTGCCGCGAAGCTACCATCCGCTGGA261380.1821088663775322No Hit
ACACGTTCTAGCATTCAAGGTCCC260450.1814609160916224No Hit
ATTACTGCCAGCTGGGACTGAGGACTGCGACG260420.18144001446949626No Hit
ACCTATGCCGACTAGGGATCGGGTGGTG259660.18091050670896783No Hit
ATTGTGGCGTCGCTGAACCATAGC250760.17470969214488474No Hit
AATAGATGGATACGAATAAGGCGTCC249800.17404084023684882No Hit
ATTGACCTCAAATCAGGTAGGAGTACCCGCTGA236030.16444699568095847No Hit
ACCAGGGGGCATGCCTGTTTGAGCGTCATT230790.16079617901626236No Hit
AACTATGCCGACTAGGGATCGGGTGGTGT230420.16053839234337353No Hit
ATATATAGATGGATACGAATAAGGCGTCC229960.1602179008041063No Hit
ATTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCG229780.16009249107134957No Hit
ACCACGACTAACCTTACCATATTTTGAATATT228850.15944454078543976No Hit
ACGCGCGCTACACTGACGGAGCCAGCG211620.14744004247766992No Hit
AATGATTAATAGGGACGGTCGGGGGC206110.14360111121383873No Hit
ATCACGTTCTAGCATTCAAGGTCCC205390.14309947228281178No Hit
ATTTCCAGGGGGCATGCCTGTTTGAGCGTCATT194270.13535193768139558No Hit
AT190160.13248841545011678No Hit
ATCCATCTAAAGCTAAATATT188740.13149907200281363No Hit
ATTTTGATGATTCATAATAACTTTTCGAATCGCAT187230.13044702368913214No Hit
AACGCGAAACTCAGGTGCTGCAATCT184760.1287261234674147No Hit
AACTTTCAACAACGGATCTCTTGGTTCTCGCATCG176290.12282489882047269No Hit
AACGTTCTAGCATTCAAGGTCCC172750.1203585074095902No Hit
AACGCGCGCTACACTGACGGAGCCAGCGAGTC171760.11966875387942816No Hit
AAAGAGGTGCACAATCGACCGATCCTG171280.1193343279254102No Hit
ATGTGGCGTCGCTGAACCATAGCAGGCTAGC170070.11849129583298991No Hit
ATTGTGGCGTCGCTGAACCATAGCAGGCT166730.11616424856961491No Hit
ACAGGCATTGCCGCGAAGCTACCATCCGCTGGA164520.1146244957396572No Hit
AATTCCAGGGGGCATGCCTGTTTGAGC161420.11246466145329118No Hit
AACCGAACGTAGAGTTAAGGTGCCGGAATACACGCT159290.11098064628233646No Hit
ATCTTTGAACGCACATTGCGCCCCTTGG159170.11089703979383198No Hit
ACCGGAGATGGGGTCTTATGGCTGGAAGAGGCCAGC158950.11074376123157373No Hit
ATGTGGCGTCGCTGAACCATAG157880.1099982700424087No Hit
ATTCCAGGGGGCATGCCTGTTTGAGCGTCATTT155600.10840974676082336No Hit
ATTTGATGATTCATAATAACTTTTCGAATCGCA154830.10787327179291954No Hit
ATTGCCGCGAAGCTACCATCCGCTGGATTATGGCTG154260.10747614097252321No Hit
ATTCAGGCATTGCCGCGAAGCTACCATCCGCTGGA151670.10567163426230129No Hit
ATTTGCCGCGAAGCTACCATCCGCTGGA150230.1046683564002474No Hit
ACATAGATGGATACGAATAAGGCGTC149910.10444540576423542No Hit
ATTGACCTCAAATCAGGTAGGAGTACCCGCTGAAC148750.10363720970869199No Hit
ATTTCCAGGGGGCATGCCTGTTTGAGCGTCATTT146980.10240401400325076No Hit
ACCGGAGATGGGGTCTTATGGCTGGAAGAGGCCAGCA146310.10193721110910067No Hit
ATGTGGCGTCGCTGAACCATAGCAGGCTAGCA146120.10180483416896857No Hit
AGCCAAGGACGTTTTCATTAATCAAGAAC144320.1005507368414012No Hit
ACCGCACGCGCGCTACACTGACGGAGCCAGCG144120.10041139269389374No Hit
ATTGCTGGCTCCGGTGCGCTTGTGACGGCC143610.10005606511774964No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)