FastQCFastQC Report
Sun 2 Jul 2023
SRR2954800_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2954800_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6614307
Total Bases209.7 Mbp
Sequences flagged as poor quality0
Sequence length24-48
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGATCAAAAGGGACAAGCATCAAGCACGCAGC2898154.3816381670823565No Hit
GATCAAAAGGGACAAGCATCAAGCACGCAGC1802562.7252439295605724No Hit
AATACAAGCTTGGGCTGCAGGTCGACCCGTGC620890.9387075622586009No Hit
AACATCACCTCTAGCATCACCAGTATTAGAGGC551740.8341614624177559No Hit
AAACATCACCTCTAGCATCACCAGTATTAGAGGC343240.5189356950017591No Hit
GCCTGGTGATAGCTGGTTGTCCAAGATAGAAT273160.4129835521695622No Hit
AATACAAGCTTGGGCTGCAGGTCGACCCGTG220340.3331263577575096No Hit
AACTTTGCAAGGAGAGCCAAAGCTAAGACCC197330.2983381327779312No Hit
ACATCACCTCTAGCATCACCAGTATTAGAGGC194540.2941200038038755No Hit
ACGATCAAAAGGGACAAGCATCAAGCACGCAGC178180.2693857421495555No Hit
GATCCAAAGGGACAAGCATCAAGCACGCAGC148640.22472497874682865No Hit
AACTTTGCAAGGAGAGCCAAAGCTAAGACC136440.20628011369898616No Hit
TTATACCCACACCCACCCAAGAACAGGGTTTA133280.2015025912767581No Hit
AGCCTGGTGATAGCTGGTTGTCCAAGATAGAAT127670.19302097710311905No Hit
AACTTTGCAAGGAGAGCCAAAGCTAAGACCCC127420.19264300855705668No Hit
GGGAGACCGCCTGGGAATACCGGGTGCTGTAGGCTT119690.18095622111280893No Hit
ATCAAAAGGGACAAGCATCAAGCACGCAGC109830.16604914165611No Hit
TTATACCCACACCCACCCAAGAACAGGGTTTAAAA102360.1547554414997671No Hit
ATGCAGCTCAAAACGCTTAGCCTAGCCACAC99480.15040124384912887No Hit
CCCTATGGAGCTTTAATTTATTAATGCAAACAGT97300.1471053581274652No Hit
AGACCGCCTGGGAATACCGGGTGCTGTAGGCTT95230.14397577856606897No Hit
TATACCCACACCCACCCAAGAACAGGGTTTAAAA91000.13758055076669407No Hit
ATTATACCCACACCCACCCAAGAACAGGGTTTA88990.13454168365635283No Hit
GCCTGGTGATAGCTGGTTGTCCAAGATAGAA83080.12560650722743893No Hit
AACTTTGCAAGGAGAGCCAAAGCTAAGACCCCC82500.1247296202005743No Hit
CCCCTTGTAAATTTAACTGTTAGTCCAAAGAGG74870.11319402017475148No Hit
TCCCCTTGTAAATTTAACTGTTAGTCCAAAGAGG71580.10821995410857102No Hit
GGAGACCGCCTGGGAATACCGGGTGCTGTAGGCTT70050.10590678660666947No Hit
AGCTTGGGCTGCAGGTCGACCCGTGC69440.10498454335427733No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)