FastQCFastQC Report
Sun 2 Jul 2023
SRR3182047.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR3182047.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26370468
Total Bases2.6 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1903780.7219363721569143No Hit
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN350060.1327469804479769No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)