FastQCFastQC Report
Sun 2 Jul 2023
SRR3182048.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR3182048.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences43605300
Total Bases4.4 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN785390.1801134265788792No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN734970.16855061196689392No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)