FastQCFastQC Report
Sun 2 Jul 2023
SRR3356526_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR3356526_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59116544
Total Bases1.6 Gbp
Sequences flagged as poor quality0
Sequence length20-40
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCGCCCGTCACGTTGAACGCACGTT1190410.20136664281321992No Hit
GTCGCGGCGTGGGAAATGTGGCG796000.13464927855051878No Hit
TTGGTGACTCTAGATAACCTCGGGCC622310.10526833233011727No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)