FastQCFastQC Report
Thu 28 Sept 2023
SRR3710297.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR3710297.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75376294
Total Bases3 Gbp
Sequences flagged as poor quality0
Sequence length40
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCGTTAAGGCATTAACGCGAACTCGGCCTACAATAGTGA1350420.17915712332580322No Hit
CTATTGTAGGCATTAACGCGAACTCGGCCTACAATAGTGA1063000.14102577131213165No Hit
CGGCATACGGCATTAACGCGAACTCGGCCTACAATAGTGA868590.11523384261900697No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)