FastQCFastQC Report
Thu 28 Sept 2023
SRR3710302.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR3710302.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25237545
Total Bases1 Gbp
Sequences flagged as poor quality0
Sequence length40
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCAGAAGTGATGCAAGCTTCTTGATCAAAGTATCACGAG517110.2048971086530009No Hit
AAGCAGAATGATGCAAGCTTCTTGATCAAAGTATCACGAG427580.16942218428931974No Hit
GCAAGCAGTGATGCAAGCTTCTTGATCAAAGTATCACGAG359560.14247027593214792No Hit
AAGCAGAGTGATGCAAGCTTCTTGATCAAAGTATCACGAG269090.10662289061792657No Hit
AGAAGCGGTGATGCAAGCTTCTTGATCAAAGTATCACGAG254090.1006793648114347No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)