FastQCFastQC Report
Sun 2 Jul 2023
SRR4045282.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4045282.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22136655
Total Bases611.6 Mbp
Sequences flagged as poor quality0
Sequence length3-35
%GC74

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC12008275.424609092927544No Hit
CCCCCCGCGGGGGCGCGCCGGC5032052.2731754187793953No Hit
AGGGGGGTCTCCCCCGCGGGGGCGCGCCGGC3160001.4274966113895708No Hit
TTCCCCCGCGGGGGCGCGCCGGC3096441.398784052965545No Hit
TCCCCCGCGGGGGCGCGCCGGC2704391.2216796078721017No Hit
CCCCCCGCGGGGGCGCGCCGGCG2552201.1529293834140704No Hit
ACGATGCCGACCGGCGATGCGGCGGCG2461191.1118165775271829No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGCCG2441541.1029398976493965No Hit
TCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT2290461.0346911039630875No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1984870.8966440503319042No Hit
TGCGCGCGGGTCGGGGGGCGGGGCGGACTGT1956300.8837378547029802No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCCG1743480.7875986683624966No Hit
AGGGGGGTCTCCCCCGCGGGGGCGCGCCGGCG1674160.7562840907987227No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC1664800.7520558096966321No Hit
TCGCCCCAGCTGCGGCGGGCGTCGCG1647330.7441639217849308No Hit
TCCCCCGCGGGGGCGCGCCGGCG1546640.6986782781770778No Hit
TTCCCCCGCGGGGGCGCGCCGGCG1474180.6659452387905942No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGCCGC1341320.6059271375914744No Hit
TTCTCGCTTCTGGCGCCAAGCGCCCGGCCG1273360.5752269256579189No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCCG1251000.5651260319140359No Hit
TCTCCCCCGCGGGGGCGCGCCGGC1172570.5296961081066675No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCG1158130.5231729906799378No Hit
TGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC970030.4382008031475397No Hit
TCGCCGCGGCCCGGGTTCGATTCCCGGTCAGGG962130.43463206161906576No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCCGC882110.39848387211166275No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT856540.38693289478469084No Hit
TAACGATGCCGACCGGCGATGCGGCGGCG808170.3650822583628827No Hit
TCCCCCCCGCGGGGGCGCGCCGGC769110.3474373160714661No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCG761820.34414413559772244No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCC761150.3438414701769531No Hit
TCGATGCCGACCGGCGATGCGGCGGCG760080.34335810898259017No Hit
AACGATGCCGACCGGCGATGCGGCGGCG759760.3432135523637153No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCCTC733730.3314547748971107No Hit
TAGCCTCGGTTGGCCTCGGATAGCCGGTCCCC707460.31958757996634996No Hit
TCCCCGCCCCTTGCCTCTCGGC676440.30557462272416497No Hit
TTCTCGCTTCTGGCGCCAAGCGCCCGGCCGC665850.30079070211827397No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCC649940.2936035277235879No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCGTTA633770.2862989010760659No Hit
TCGCCGCGGCCCGGGTTCGATTCCCGGTCAGG632290.28563032671376953No Hit
CCCCCGCCCCTTGCCTCTCGGC626500.2830147553910019No Hit
CCGCGAGGGGGGCCCGGGC618250.27928790506063356No Hit
TCGCGGCGCCTCGCCTCGGCCGGCG617530.2789626526681651No Hit
GCGCGCGGGTCGGGGGGCGGGGCGGACTGT615700.2781359695039743No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC592350.2675878537204469No Hit
TCGCTTCTGGCGCCACGCGCCCGGCCG588490.26584413950526853No Hit
TGTGGGGGGGCCGGGCCACCCCTCCCACGGCG573780.25919905243136326No Hit
GGGGGGGTCTCCCCCGCGGGGGCGCGCCGGC568120.2566422072350136No Hit
TCTCCCCCGCGGGGGCGCGCCGGCG565720.2555580325934519No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCG545980.24664069616660692No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCCGC544600.24601729574770895No Hit
CGCGCGGGTCGGGGGGCGGGGCGGACTGT533100.24082229225689247No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGCC532760.2406687008493379No Hit
TCCCCGCCCCTTGCCTCTCGGCGCCCC530460.2396297001511746No Hit
CGCGGCGCCTCGCCTCGGCCGGCG523470.23647204150762613No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCGTTA502340.22692678726754334No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC501810.22668736536753184No Hit
TCGGCGGATCTTTCCCG486870.21993837822381024No Hit
GGGTCGCGCCGTCGGGCCCGGGGG473010.21367726966879141No Hit
TCGCCCCCGCTGCGGCGGGCGTCGCG471460.21297707354611617No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGC469320.2120103511573903No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCG460200.20789048751945588No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGC456160.20606546020616032No Hit
TCTCGCCGGCCGAGGTGGGATCCCGAGGCCTC437940.1978347677189711No Hit
TTACCCTACGCCGGCAGGCGCGGGT436930.1973785108906472No Hit
TCCCCGCCCCTTGCCTCTCGGCG434520.19628981885474567No Hit
TCGCCGCGGCCCGGGTTCGATTCCCGGTCAG433450.19580645766038274No Hit
CTCGCTTCTGGCGCCCAGCGCCCGGCCG429580.1940582260508645No Hit
TCCCCCCCGCGGGGGCGCGCCGGCG409670.18506409392024223No Hit
CTCCCCCCCGCGGGGGCGCGCCGGC402990.18204647450122882No Hit
TCTCGCTTCTGGCGCCAAGCGCCCG401780.18149986978610816No Hit
TTCGCTTCTGGCGCCAAGCGCCCGGCCG396820.1792592421935473No Hit
TCGGGTCGCGCCGTCGGGCCCGGGGG388600.17554594404619847No Hit
ACCCCCGCGGGGAATCCCCC367380.16596003325705713No Hit
AGGGGCCCGGGGCGGGGTCCGCCGG366570.16559412431553006No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTTA358830.1620976610964936No Hit
TGAGCCTCGGTTGGCCTCGGATAGCCGGTCCCC357480.16148781286061512No Hit
TCACCCCCGCGGGGAATCCCCC346390.1564780225377321No Hit
CCTCGCTTCTGGCGCCAAGCGCCCGGCCG345670.15615277014526358No Hit
TCGCTTCTGGCGCCAAGCGCCCGGC345210.15594497000563093No Hit
TCGCGCGGGTCGGGGGGCGGGGCGGACTGT339220.15323905079606653No Hit
CCCCCGCGGGGGCGCGCCGGC335430.151526958341267No Hit
TCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTT332980.1504201967280061No Hit
ACCCCTCCTCCCCGCGC325980.1472580206901178No Hit
TCACCGCCCGTCCCCGCCCCTTGCCTCTCGGC325470.14702763357878595No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC325280.14694180308632898No Hit
TCGCTTCTGGCGCCACGCGCCCGGCCGC318510.14388352711825703No Hit
CTCGCCGGCCGAGGTGGGATCCCGAGGCCTC318170.14372993571070244No Hit
CCCCCGCCCCTTGCCTCTCGGCGCCCC316610.14302522219368735No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGCC315780.1426502784634806No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGG315740.14263220888612121No Hit
TAACGATGCCGACCGGCGATGCGGCGGCGTTA312700.14125892100680973No Hit
TCCCCGCGAGGGGCCCGGGGCGGGG302240.13653372652733667No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCCTCT300560.13577480427824348No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTT298570.13487584280461523No Hit
CTCTCGCTTCTGGCGCCAAGCGCCCGGCCG294780.13316375034981573No Hit
CCCCCGCCCCTTGCCTCTCGGCG294260.13292884584414402No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCG293820.13273008049319104No Hit
TCCCTGGTGGTCTAGTGGTTAGGATT291870.13184918859692216No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCCT282710.12771125538162834No Hit
TCCCCGCGGGGGCGCGCCGGC275880.12462587504751735No Hit
TCCCCGCCCCTTGCCTCTCGGCGCCC269880.1219154384436131No Hit
TCTCGCCGGCCGAGGTGGGATCCCGAGGCC268810.12143207724925016No Hit
CTCCCCCGCGGGGGCGCGCCGGC268760.12140949027755098No Hit
TAGGGGGGTCTCCCCCGCGGGGGCGCGCCGGC266280.12028917648127053No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGC260140.11751549635660853No Hit
CGCGCGCGGGTCGGGGGGCGGGGCGGACTGT258810.11691468290940975No Hit
CCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT257860.11648553044712492No Hit
GGGGGGGTCTCCCCCGCGGGGGCGCGCCGGCG256500.11587116481690661No Hit
TTCCCCGCGAGGGGCCCGGGGCGGG254520.11497672073761821No Hit
TCGCCGCGGCCCGGGTTCGATTCCCGGTCAGGGA253030.11430362898098198No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTTATT252160.11391061567341589No Hit
CCCCGCCCCTTGCCTCTCGGC250300.11307038032620556No Hit
TCGCCGCGGCCCGGGTTCGTTTCCCGGTCAGGG249800.11284451060921354No Hit
GCCTCGGTTGGCCTCGGATAGCCGGTCCCC248900.11243794511862791No Hit
TGCGCGCGGGTCGGGGGGCGGGGCGGACTG247440.11177840554501121No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC246170.11120469646385146No Hit
ACGATGCCGCCCGGCGATGCGGCGGCG243800.1101340740053093No Hit
TTCTCGCTTCTGGCGCCAAGCGCCCGGC242930.10974106069774317No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCGTT242910.1097320259090635No Hit
CCCCCGCGGGGGCGCGCCGGCG240660.10871561218259941No Hit
ATCTGAGGGTCCAGGGTTCAGGTCCCTGTTCG237810.10742815479574488No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCGTT231040.10436987882767293No Hit
CCCCCCCGCGGGGGCGCGCCGGC230510.10413045692766137No Hit
CGTGGATCGCCCCAGCTGCGGCGGGCGTCGCG229770.10379616974651319No Hit
TTCCCCGCGAGGGGCCCGGGGCGGGG228770.10334443031252914No Hit
TCCCCGCGAGGGGCCCGGGGCGGG226140.10215635560115112No Hit
ACCCCCGCGGGGAATCCCCCG224350.1013477420143197No Hit
TTCTCCCCCGCGGGGGCGCGCCGGC224070.10122125497280415No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)