FastQCFastQC Report
Fri 29 Sept 2023
SRR5996797_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5996797_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences248358225
Total Bases12.4 Gbp
Sequences flagged as poor quality0
Sequence length50
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)