FastQCFastQC Report
Tue 4 Jul 2023
SRR6026777_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6026777_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences462259
Total Bases13.4 Mbp
Sequences flagged as poor quality0
Sequence length24-68
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGGTCGGCGTCGTGCATTTATCAG22490.4865237886120119No Hit
ACTCGAAGAGAATCTACTGGTCTT8050.17414479761345913No Hit
TCGGTTGGCCTCGGATGGCCGGTC7670.16592429785033933No Hit
CTCGCTTCTGGCACCAAGCGCCCGG5310.1148706677425426No Hit
TGCGGCCAAAGAGTAACTTGGGATC4720.10210726021559344No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)