FastQCFastQC Report
Tue 4 Jul 2023
SRR6026778_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6026778_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences388884
Total Bases10.4 Mbp
Sequences flagged as poor quality0
Sequence length24-68
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTCGAAGAGAATCTACTGGTCTT11720.3013752172884459No Hit
TCGGTTGGCCTCGGATGGCCGGTC9080.23348864957159463No Hit
TGCGGCCAAAGAGTAACTTGGGATC8560.22011705290009362No Hit
AGGACACACAGCAATTCCCTCTCAGT6660.1712592958311476No Hit
TCAAGTGATGTCATCTTACTACTGAGA5720.14708756338651113No Hit
TGCATGCAAGAGCAACCTGGAAAGA5590.1437446642186359No Hit
ATGCGGCCAAAGAGTAACTTGGGATC5220.13423025889468326No Hit
GCATGCAAGAGCAACCTGGAAAGA4860.12497299966056717No Hit
TCCTCGAAGAGTAACTGCTGACCT4650.11957293177399944No Hit
AGGACACACAGCAATTCCCTCTCAG4010.10311558202445975No Hit
TGACCAAAGATGGAAGTTCTCTAT3890.10002982894642104No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)